Brassica oleracea (wild cabbage): 106296744
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Entry
106296744 CDS
T04124
Name
(RefSeq) cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106296744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106296744
03009 Ribosome biogenesis [BR:
boe03009
]
106296744
04131 Membrane trafficking [BR:
boe04131
]
106296744
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106296744
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106296744
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106296744
Membrane trafficking [BR:
boe04131
]
SNARE
SNARE associated proteins
Others
106296744
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106296744
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106296744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
AAA_18
ATPase_2
AAA_17
Parvo_NS1
IstB_IS21
ABC_tran
AAA_7
Vps4_C
NACHT
NB-ARC
Viral_helicase1
AAA_lid_PRS2_C
DUF815
TsaE
AAA_24
Zeta_toxin
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
106296744
NCBI-ProteinID:
XP_013588422
UniProt:
A0A0D3CTJ9
LinkDB
All DBs
Position
C6:18577811..18582031
Genome browser
AA seq
810 aa
AA seq
DB search
MANQPESSDPKGAKRDFSTAILEKKKAVNRLVVDEAINDDNSVVSLHPETMEKLQLFRGD
TILLKGKKRKDTVCIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSIHQCPDVKYGKRVH
ILPLDDTIEGITGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPDEYCV
VAPDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDEEIDAEILNSMAVTNEHFQTALGNSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQI
FKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERKKAET
PEAMEEDEEEIAEIKASHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGIGSEFRFPDA
TGTGGAAAMAGGGDPFATAGGAAEDDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcaacctgaatcatctgatccgaagggagcgaagagggactttagcaccgcg
attttggagaagaagaaggcggtgaatcgtttggttgtggatgaggccatcaacgatgac
aactccgtcgtgtctctacaccctgaaaccatggagaagctacagctctttcgtggagat
accatcttactcaaggggaagaagaggaaggatactgtgtgtattgctttagctgatgac
acatgtgatgaaccaaagattaggatgaacaaagttgtcaggtcgaacctgagagttagg
ctcggagatgtagtctctatccatcagtgccctgatgtcaagtatgggaagcgtgttcac
atcttacccttagatgataccattgaagggattactggaaatatatttgatgcctacctt
aaaccttatttcttggaggcataccgcccagtgaggaagggtgatcttttcctagttaga
ggagggatgagaagtgttgagtttaaggttattgagaccgatcctgatgagtactgtgtg
gtggctccagacacagagatattctgtgagggtgaacctataaagagagaggatgaggag
aggttggatgaagttggttacgatgatgtcggtggtgttaggaaacaaatggctcagatt
agggaacttgttgagctccctttgaggcacccacagctcttcaagtccatcggtgttaag
cctcctaaaggaatcttactctatggccctcctggttcaggcaagacactgattgctcgt
gctgttgctaatgagaccggtgcgtttttcttctgtatcaatggtccggagatcatgtcc
aagctagctggtgagagtgaaagcaaccttaggaaagcgttcgaggaggctgagaagaat
gcaccttccatcattttcattgatgagcttgattccattgctccaaaacgagagaagacg
catggggaggttgagagaaggattgtttcacagctcttgacgctaatggatggtcttaaa
tcaagagctcatgtgattgttatgggagctaccaaccgtcctaacagcattgacccggct
ttgagaaggtttggaagatttgacagggagattgatattggtgttcccgatgagattggt
cgtcttgaagttctcaggattcacaccaagaacatgaagctcgcagaagatgttgatttg
gaaagagtatctaaagacacacatgggtatgttggtgcggaccttgcggcattatgcact
gaagctgctctccaatgcatccgggagaagatggatgtgattgacctagaagatgaggag
atagatgctgagattctcaactctatggctgtgactaatgagcatttccagacagctctt
ggtaatagcaatccttctgctctacgtgagacggtcgttgaggtgcctaatgtttcttgg
gaagacattggtggtcttgagaatgtcaagagggaactacaagagactgttcaatatcca
gtggagcatcctgagaagtttgagaagtttggtatgtcgccatctaaaggagtcctgttc
tacggtcctcctggttgtggaaagacccttttggccaaggccatcgccaacgagtgtcaa
gccaatttcatcagtatcaaaggtcccgagctcctgacaatgtggttcggagaaagtgag
gccaatgtgagagagatattcgacaaagcacgccagtctgctccttgtgttcttttcttt
gatgagctagactccatcgccactcagagagggagcagcgttggagacgccggtggcgca
gcagacagagtattgaaccagcttctgacggagatggatggtatgtctgctaagaagacc
gtctttatcatcggagcaacaaacagaccagatatcatcgaccctgcgcttcttcgtccc
ggtcgtcttgatcagctcatctacattcctcttcctgatgaggagtctcgttaccagatc
tttaagtcttgcttgaggaagtctccagtggctaaagatgttgacttaagggctcttgcg
aagtacacacaagggttcagcggtgcagacatcacagagatttgtcagcgtgcttgcaag
tacgccatcagagagaacatcgagaaggatattgagaaggagaggaagaaggcagagaca
ccagaagcaatggaagaggacgaggaggagattgcagagataaaagctagtcattttgaa
gaatcaatgaagtttgcgaggaggtctgtgagtgatgcagacatacgcaagtatcaggct
tttgctcagactctccagcagtcacgtgggattgggagtgagttcaggttccctgatgcg
acaggcactggaggtgcagccgccatggctggtggaggtgacccgtttgctactgcggga
ggagcagctgaggacgatgatctctatagttaa
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