Brassica oleracea (wild cabbage): 106296844
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Entry
106296844 CDS
T04124
Name
(RefSeq) F-box protein SKP2B
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106296844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106296844
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106296844
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_NXF1-5
F-box
LRR_At1g61320_AtMIF1
Sulfolobus_pRN
Motif
Other DBs
NCBI-GeneID:
106296844
NCBI-ProteinID:
XP_013588524
UniProt:
A0A0D3CW82
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Position
C6:complement(26073771..26076175)
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AA seq
359 aa
AA seq
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MVSEEGSATLDRCFEKMKMEGIVISEWKDIPVELLMKILNLVDDRTVIIASGVCSGWRDA
ISFGLTRLSLSWCKKNLNSLVLSLAPKLVKLQTLVLRQDNPQLEDNAVEAIANHCHELQD
LDLSKSLKLTDHSLYSLARGCTNLTKLNLSGCTSFSDTALAYLTRFCRKLKVLNLCGCVE
AVSDNALQAIGENCNEMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVV
ALANKCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEMWRSVKKGKFDEEGLRSLNISQ
CTYLTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRTHTALPHPAH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgaagaagggtcagcaacacttgaccgatgctttgaaaagatgaagatggaa
ggcatcgtgatcagcgagtggaaagatatccctgtggagcttctcatgaagatccttaac
cttgttgatgatcggacggtcatcattgcttctggtgtttgcagtggctggagagatgct
atttcctttggtctcactcgtctctccctctcttggtgcaagaagaacctgaatagtttg
gttctgtctcttgctccaaaactcgtcaagcttcagacattagtattgagacaggacaac
ccccagcttgaggacaacgcagtggaagcaatagcgaatcactgtcacgagctacaagat
cttgacctaagcaaaagcttgaaactcaccgaccattctctctattctctggctcgcggt
tgcacaaacctcactaaactcaaccttagcggctgcacttcattcagcgacactgctttg
gcctatttgacaaggttttgcaggaagctcaaagttctgaatctttgtggttgtgtggaa
gctgtatctgacaatgcattgcaggctattggagaaaactgcaatgagatgcagtcacta
aacttgggatggtgtgagaatataagtgatgatggagtcatgagcctagcttatggctgt
cctgatctaagaacccttgatctttgcggctgtgttctaattacagatgagagtgttgtt
gctttggcaaataagtgtgtacacttgaggtcgttggggttatactattgcaggaacata
acagacagagcaatgtactcactggctcagagtggagtgaagaacaagcacgagatgtgg
cggtcggttaagaaaggaaaattcgatgaagaaggtctaagaagcctcaacattagccaa
tgcacttacctcacaccttcagcggttcaagctgtctgtgatacattccctgcgctccac
acttgctcaggcaggcattctctggtcatgagtggttgtctgaatctaacatcagttcac
tgtgcctgtatcctccaggctcaccgcacccacaccgctctccctcacccggctcattaa
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