Brassica oleracea (wild cabbage): 106296874
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Entry
106296874 CDS
T04124
Name
(RefSeq) F-box protein SKP2B-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106296874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106296874
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
106296874
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Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_8
Sulfolobus_pRN
Motif
Other DBs
NCBI-GeneID:
106296874
NCBI-ProteinID:
XP_013588567
UniProt:
A0A0D3D1A8
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Position
C6:38319783..38322112
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AA seq
355 aa
AA seq
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MMSEGGSLNLCFEKMEGNMITEWKDIPVELLMRILNLVDDRTVIIASGVCSGWRDAISFG
LTRLSLSWCKKDMNSLVLSLAPKLVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLS
KSLKLTDHSLYSLARGCTNLTKLNLSGCTSFSDTALAYLTRFCRKLKVLNLCGCVEAVSD
SALQAIGENCSQMQSLNLGWCEKISDDGVMSLAYGCPDLRSLDLCGCVLITDESVVALAN
RCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEMWRSVKKGKFDEEGLRNLNISQCTYL
TPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRTHTALPHPAH
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgaaggaggatcacttaacctatgcttcgagaagatggaaggaaacatgatc
accgagtggaaagatatccctgtggagcttctcatgaggatccttaaccttgttgatgat
cggacggtcatcattgcttctggtgtttgctctggctggagagatgctatctcctttggt
ctcactcgtctctccctttcatggtgcaagaaagacatgaacagtttggttctgtctctc
gcaccaaaactcgtcaagcttcagactctagtacttagacaagacaaaccgcaactcgaa
gacaacgcagtggaagccatagcgaatcactgtcacgagttacaagatcttgacctaagc
aaaagcttgaaactcactgaccactccctctattctctagctcgcggctgcactaacctc
actaaactcaaccttagcggctgcacttcgttcagcgacactgctctcgcgtatttgaca
aggttttgtaggaagcttaaagttctgaatctttgtggttgtgtggaagctgtatctgac
agtgcattgcaggctattggagagaactgtagtcaaatgcagtcactaaacttgggatgg
tgtgagaagataagtgatgatggtgtcatgagtttagcttatggttgtcctgatcttaga
agccttgatctctgtggctgtgtacttattacagatgagagtgtggtggctttggctaat
cgttgtgtacacttaaggtcattggggctatactattgcagaaacataaccgacagggcc
atgtactcgctggctcagagcggagtgaagaacaaacacgagatgtggagatcggttaag
aaaggcaaattcgacgaagaaggactaagaaaccttaacattagccaatgcacttacctc
acaccttcagctgttcaagcggtttgtgatacgttccctgcgctccacacttgttcaggc
aggcattcacttgtcatgagcggttgtctgaacttaacatcggttcactgtgcttgcatc
cttcaggctcaccgcacacacacagctttacctcacccggctcattga
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