Brassica oleracea (wild cabbage): 106297036
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Entry
106297036 CDS
T04124
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106297036
Enzymes [BR:
boe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
106297036
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106297036
Prokaryotic type
106297036
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
106297036
NCBI-ProteinID:
XP_013588769
UniProt:
A0A0D3D120
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Position
C6:complement(37827685..37829447)
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AA seq
447 aa
AA seq
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MSTTITAGDVTDFSGGGEERRKVAIILAFCGVGYLGMQRNPGAKTIEGELEEALFRAGSV
TETDRGKPKQYDFTRCARTDKGVSAVGQVVSGRFHVDPPGFVDRLNANLPDQIRVFGYRR
VPEKFSSKKFCDRRRYVYLLPVFALDPFTHRDREAVMASLGSGEEYVKCFECSERGRKNK
ITGVVGKLKGDSFDAKSLDVRSDITSNSLSALRTDVKSKFCYGEEEKERFNRILSYYVGS
YNFHNFTTRIKADDPAANRSIISFTANTVISLDGIDFIKCEVLGQSFMLHQIRKMMGLAV
AIMRNCAPESLIETAFSKDVNITVPMAPEVGLYLDECFFTAYNNTQFEDGHEEVSMEAYK
EEAEAFKLKHIYSHIGSAERRYGSVALWLHSLNYRNYPDLNYGRNGHNTEPVLVYKTVGE
AQETTEPEQNDENSQVKTSKDTITVVA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccaccatcaccgccggcgacgttacagacttctccggcggcggagaagaacgg
agaaaagtcgctataatcttagcgttttgcggcgtgggttatctagggatgcaaaggaac
cccggcgcgaaaaccatagaaggcgagctcgaagaagctctgtttcgcgccggatctgta
acggagaccgatcgtggcaagccgaagcagtacgacttcacgcggtgcgcgcggaccgat
aaaggagtgagcgccgtgggacaagtcgtctccggtcgattccacgttgaccctcctggg
tttgtggatcggctcaacgctaatctccctgatcagattagggtttttggttacaggcgt
gttccagagaagtttagctccaagaagttctgtgatcggaggaggtatgtgtatctgctc
cccgtgtttgctcttgatccgttcacgcatcgtgatagagaagcggtgatggctagtttg
ggttctggagaggagtatgtgaagtgtttcgagtgttctgagagagggcgtaagaacaag
atcactggtgttgtgggcaagttgaaaggtgatagctttgacgctaagtcattggatgtt
cggtcagacattacgtcgaacagcttgagtgcgttgagaactgatgtaaagagtaagttt
tgttacggtgaagaagagaaggagaggtttaataggatactgagttattatgttgggtcg
tataattttcataatttcactactaggataaaggctgatgatccagctgcgaatcgttcc
atcatctccttcactgcaaacactgttattagtcttgatgggattgactttatcaagtgt
gaagtattgggacaaagcttcatgcttcatcagattcggaagatgatgggtcttgctgtt
gctatcatgaggaactgtgctcctgagtcacttatcgagactgctttcagcaaagatgtg
aatataactgtaccaatggcgccagaagtaggactttacttggatgaatgcttcttcacg
gcttataacaacacacaatttgaagatgggcatgaggaagtgtcgatggaagcatacaag
gaagaagctgaagcctttaaattgaagcatatatattctcatataggctctgctgagcga
agatatggatctgtagctctttggttgcattccttgaactatagaaactatcctgaccta
aactatggcagaaatggacacaacacagaaccagttcttgtctacaagactgttggcgag
gcccaagaaacaacagagccagagcaaaatgatgaaaactctcaagtcaagacctccaaa
gacaccattactgtagtagcttaa
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