Brassica oleracea (wild cabbage): 106297065
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Entry
106297065 CDS
T04124
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03440
Homologous recombination
boe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106297065
03460 Fanconi anemia pathway
106297065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106297065
03036 Chromosome and associated proteins [BR:
boe03036
]
106297065
03400 DNA repair and recombination proteins [BR:
boe03400
]
106297065
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106297065
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
106297065
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
106297065
FA (Fanconi anemia) pathway
Downstream FA components
106297065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Orbi_NS1
DUF4503
Motif
Other DBs
NCBI-GeneID:
106297065
NCBI-ProteinID:
XP_013588805
LinkDB
All DBs
Position
C6:14940203..14945843
Genome browser
AA seq
1042 aa
AA seq
DB search
MSTWQLLPDSSGDGFRWNAAGRILQSGKSDSPPTAAPPLPSMADLLLRGCSKLIEPEESK
PTMFTTALGKSVALKESSISRAKSILTDSDDIARFGVPNSCFQTASNKKVNVSSAGMARA
KALLGLEEDDDFSGFKHVNHRLPSSHQQHGLTTPETFGAQNRSVTPGGHYVPGKRSEILS
SSPKVPQTKFQTAGGRSLSVSVEALNRARSLLGDPELGPFFDDVHHFVTPQKDKWIGGDI
AHESNKHTSNSFISPLQSSSKQFRSVKLEDVASGVNLINKFDAAVDETHGNRPLASDKAV
NNTMGTGFIPRSTQFGRQAHQPLVDITNRNHIAHANNRQESSQKKRLGKTVSVPPFKRPR
TSSFKSPLMKNDQHPSNGFSVVSCDTQYSKRVFSTRTEERSPRIYIKDYFGMRPRATTKM
AVPEHVRRIKSSNAEKYVFGDVSSSSVVGAETFHQMLAESGASLQCASREWVTNHYRWIV
WKLACYETYYPAKCRGNFLTITNVLQELRYRYEREVNHGHCSAIKRILSGDAPASSMMVL
CISAINPKARETHGSDSGSNVKIELTDGWYSINAALDVMLQKQLNAGKLFIGQKLRILGA
GLSGWTTPTSPLEAVISNTIYLLLNINGTYRAHWADRLGFCKEVGVPLALNCIKCNGGPV
PKTLAGITRIYPILYKEKLGEKKSVVRSERMEWRMIELHNQRRSDLIEGLICENQGGING
VDSQNDTDSKEGAKLFKLLESAAEPDFLMADMSMEELNCFNRYKEKFEAAMEKKMEKSVA
KALEDAGLGERDVTPFMRIRLVGLTSLSYDGHPNPKEAILTIWNPTETQRTELTEGKIYA
MKGLVPMNIDSETLYLHARGSSSRLQPLSPKASERFQPFFNPRKSMSLLDLGEILLGSEF
DMAAYVVYVGNAYTDVDQKKQWVFVTDGSLQYSDSGKIANSLLAISFRTSSMDDLHSPLI
SHNLVGSVVGFCNLIKRANDVENDMWVCEAMENSDYFLNADPACPSHLKTSSGHIQIWAN
LSFSKSIIDQLRQRALFIVGAC
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagctattacccgattcaagcggcgacggtttccggtggaatgcagct
ggccggattcttcagtctggcaaatccgattctccgccaaccgcagctccccctctacct
tccatggcggatctcttgctccgaggatgctcgaaacttatagaaccagaggaatcgaag
ccaacaatgttcacgactgctctgggcaaatctgtagctcttaaagagtcttcgatttcc
agagccaaatcgattttaacagattcagacgatatcgctcggtttggtgttcccaactct
tgtttccagactgcttctaacaagaaggttaatgtgtcttctgctggtatggcaagagcc
aaggcattgttaggactagaagaagatgatgattttagtggattcaaacacgtgaaccac
cgtttgccttcttcccaccagcaacatgggttaacaactcctgagacgtttggtgctcag
aatcgttctgtaactccaggaggacattatgtacctgggaaaagatctgaaattttgagt
tcatctccaaaggttcctcaaacaaagtttcaaactgctggtgggagatcattgtcagtg
tctgtggaagccttgaatcgtgccagaagccttcttggggaccctgagttagggcctttc
tttgacgatgtacatcactttgttacaccacagaaagataaatggataggtggtgatatt
gctcatgagagcaacaagcatacttcaaatagtttcatatctcctcttcaatcatcttca
aagcaattcagatcagtcaaattggaggacgtagcttcaggggttaatttgatcaacaaa
tttgatgcggctgttgatgagacacatggtaacaggcctttagcatctgataaggcagtt
aacaataccatgggaaccggtttcattccaagatctacacaatttggaaggcaagctcac
cagccacttgtcgatatcacaaatcgcaatcatatagctcatgctaacaatagacaagaa
agtagccaaaagaaaagactgggaaagacagtctccgttcctccttttaaaaggccgaga
acctcctcctttaaatctcctctaatgaaaaatgaccagcatccttcaaatggtttttct
gtagtatcttgtgatacacaatattccaaaagggtgttttctacaagaactgaagaaagg
tctccaagaatatatatcaaggattattttggaatgcgtccaagagctacgaccaagatg
gctgtgccagaacatgtcagaagaatcaaatcaagtaatgcagagaaatatgtatttggt
gatgtgtcttcttcaagcgtggtgggagctgaaacttttcatcagatgttggcagaatct
ggtgcttctttacaatgtgcatctagagagtgggtcaccaatcactacaggtggatagtc
tggaaactcgcatgctacgagacatactacccagccaaatgcagaggaaactttctgacg
atcaccaatgtcctccaggaactaagatatagatatgagagagaggtcaatcatggtcac
tgctctgcaataaagaggattctgagtggtgatgctccagcttcttcaatgatggtgctc
tgcatatctgctattaatccaaaggctcgagaaacacatggttctgatagtggcagcaat
gtgaaaatagaactcactgatgggtggtattcgataaatgctgctctggatgtcatgctg
caaaaacagctgaatgctggaaaattgtttatcgggcagaagcttcggattcttggggca
ggactttctggctggactaccccaacatcacctcttgaggcagtgatttcgaatacaatc
tatttgttgttgaatattaatgggacatacagagctcactgggcggaccgactaggattc
tgtaaagaagttggtgtccctctggctctcaactgtatcaagtgcaatgggggccctgtg
cctaaaacgttagctggaattacacgaatataccctatcctatacaaggaaaagttaggt
gaaaagaagtcagtagttcgatcagagaggatggaatggagaatgatcgagctgcataac
cagaggcgctcagatcttatagagggtcttatatgtgagaaccagggaggaatcaatggt
gtcgacagccagaacgatactgacagcaaagaaggagccaagctctttaagctgttagag
tctgctgctgaacctgatttcctaatggcagatatgagtatggaagagttgaactgtttc
aacagatataaagaaaagtttgaggcggccatggaaaaaaagatggaaaaatcagttgca
aaagctctggaagacgctggcttaggtgaaagggatgtcactccattcatgaggattagg
cttgttggactgacgagcttaagttatgatggacacccaaatccaaaagaagccatttta
acaatctggaatccaacggagacacagagaaccgagttgacagaggggaaaatatacgca
atgaaggggctagtaccaatgaacatagattcagaaacactgtacttacatgccagagga
tccagctcaagattgcagcctttgtctccaaaagcttctgaaagatttcagccctttttc
aacccccgtaaatcgatgtcattgttggatcttggtgaaattcttcttggaagtgaattt
gatatggcggcgtacgttgtatatgttggaaatgcgtacacggatgttgaccaaaagaag
cagtgggtgtttgttacagatggatccttacaatattcagattcagggaaaatcgcaaat
agtcttctcgctataagcttccgcacatcatccatggatgacctccacagccccctcatt
agccataatcttgtcggatctgtggtagggttctgcaatctaataaaaagagccaatgat
gtggaaaacgatatgtgggtttgtgaagcgatggagaactcggactacttcttaaacgca
gatcctgcttgcccttctcaccttaaaaccagcagtggccatatccaaatatgggctaac
ctctctttttctaaatccatcatcgaccaacttcggcagagagctctatttattgtcggt
gcttgttaa
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