Brassica oleracea (wild cabbage): 106297300
Help
Entry
106297300 CDS
T04124
Name
(RefSeq) 4-substituted benzoates-glutamate ligase GH3.12-like
KO
K14487
auxin responsive GH3 gene family
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106297300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
106297300
NCBI-ProteinID:
XP_013589028
UniProt:
A0A0D3A274
LinkDB
All DBs
Position
C1:2786067..2788625
Genome browser
AA seq
581 aa
AA seq
DB search
MNTLTDKDVAMSLLEDLTSNVKQIQDEVLEEILRCDANTEYLQSFLHGSADKELFKKNVP
VGTYEDFKPYIERVVNGEPSGLVSGRPLTGFVLSSGTSSGKQKLIPMNDKYLENTKLLTD
FRSIVLSKHVDGHNQGKSLKLLFTGPSSMTLSGLPASYASTFFFKSDYFKNPPSFWDTSF
TTPGEVIYCPDTKQSLYCQLLCGLVMRDEVTGIGAVFASIFVQGMIFLEKTWKDMCSNIR
SGQLSDWITDLGCRESVSKILGGPNPQLADQIQDICSQKSWKGIIPQLWPNTKFVEGVIT
GQMAQYVPALEFYVDDQLPLYSPAYSSSESPFAVNMNPLCKPQDISYTFIPNMSYFEFLP
IDEGNDDAIVDLVDVKLGSYYELVVTTYSGLHRCKVGDVLQVTGFYNSAPQFKFVRRQNV
VISVYLEATTEEELLKAVKRATEVIESSNIMLRDFTCYPHIADTPGHYVLYWELKGNNYD
GISELDPDMMVECCSVIEESLNALYRKFRSKEKTIGALEIRVVQPGTFDSLMEYFIAQGA
TLTQYKTPRCIKSPEALQVLESKVVSRFSGEKLPHVDSVLC
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaatactctcactgacaaagatgttgccatgtcgcttcttgaggatttaacgtccaat
gtgaagcaaatacaagatgaagtattagaagagatactaagatgtgatgcaaacactgag
taccttcaaagttttctccatgggagtgctgataaagagctgttcaagaagaatgtaccg
gtagggacctatgaagatttcaagccttacatcgagcgtgtcgtcaacggagagccatct
ggtctcgtttccggcaggcctcttactggattcgtgctatcgtctggaacgtcaagcggg
aaacagaagttaatacctatgaacgacaaatacttggagaacacaaaattattaactgat
tttcggtccatcgtattatccaagcatgtcgatggtcacaaccaaggaaaatcgctgaag
ctcctcttcaccgggccatcctccatgactctatctggtttgccagcttcttacgctagt
acatttttctttaaaagcgattattttaagaacccaccatcattttgggacacttcgttc
acaactcccggtgaagttatatattgtcccgacacgaagcagagtttatactgtcaactt
ctttgtggtcttgtcatgagagatgaagttactggaatcggtgctgtgttcgcttctatc
tttgtccaaggaatgattttccttgaaaaaacttggaaagacatgtgcagtaacatacgg
tcaggtcagctcagtgactggatcaccgacctcggatgcagagaatctgtttctaagata
cttggaggacctaatcctcaattggcagaccaaatccaagacatatgcagccaaaaatca
tggaaaggtataatcccacagctttggcctaacaccaaatttgtcgagggtgttattaca
ggacagatggctcaatatgttccagcgttggagttttacgtcgatgatcagttgcctcta
tattccccagcgtattcctcttctgaatctccgttcgcggtaaatatgaatcctctatgc
aaaccacaagatatatcctacacatttattcccaacatgtcatacttcgagtttctaccg
attgatgagggaaatgatgacgcaattgtggatcttgtggacgtcaagttaggtagctac
tacgaactcgtagtcaccacttattcaggtttacacaggtgtaaagtgggtgatgttctc
caggtgactgggttttataatagcgcaccacagtttaaattcgtacgcagacaaaatgtg
gtcataagtgtatatttggaggccacaactgaagaagagcttttaaaagcagtgaaacgt
gctacagaagtcattgaatcttcaaatataatgctgagggatttcacatgctatcctcat
atcgctgacactccaggtcactatgttctttattgggaactcaaaggcaacaactatgat
ggcatcagtgagcttgatcctgatatgatggtggaatgctgctcggtaatcgaagaatca
ctcaatgctctttacaggaaatttaggagcaaggagaaaactattggagcgttggagata
agggttgttcaaccaggaacgtttgactctctcatggaatatttcattgctcaaggtgct
actttgactcaatacaagacaccgagatgcataaaatctcccgaggccttacaagttctt
gaaagcaaggttgtttctcgtttttcgggcgagaaattacctcatgtggactctgttctg
tgttaa
DBGET
integrated database retrieval system
