Brassica oleracea (wild cabbage): 106297427
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Entry
106297427 CDS
T04124
Name
(RefSeq) protein argonaute 2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106297427
03036 Chromosome and associated proteins [BR:
boe03036
]
106297427
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106297427
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106297427
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106297427
microRNA pathway
RISC loading complex
106297427
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
Motif
Other DBs
NCBI-GeneID:
106297427
NCBI-ProteinID:
XP_013589118
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Position
C6:<9364717..9366337
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AA seq
446 aa
AA seq
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PGRNNQWNLMKKGVTRGSVVKHWAVLDFTAFERNTNSRMANDFVGLLINRCGTLGMQLED
PIIFKSARMDLLSKANALEDLLRQVIDEASHKHGGARPTLVLCAMSARVDGYKTLKWIAE
TKLGLVTQCFLTNSANRGGDQYRANLALKINAKVGGSNVELMDTGYSFFKREDEVMFIGA
DVNHPAARDQTSPSIVAVVGTLNWPEANRYAARVIAQPRRKEEIEGFGDACLELVKAHFQ
ATKKQPNKIVIFRDGVSDGQFDMVLNSELLDVKLTFGRNNYFPKITVIVAQKRHQTRFFP
ATPNDASDKGNVPSGTVVDTKVIHPFEYDFYLCSHHGGIGTSKPTHYYALWDELDFTSDQ
MQKLIFDMCFTFTRCTKPVSLVPPVYYADMVAFRGRMYHEASSREKNIRQPRGAPPPPAD
SLSALTLEDKAIFKLHKELENVMFFV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ccgggacgtaacaatcaatggaaccttatgaagaagggagtcacgaggggttcagtagtc
aagcattgggctgttcttgacttcactgcctttgagaggaacaccaactccaggatggct
aacgactttgtgggcctccttattaatcgttgtgggacacttgggatgcagctggaggat
cccatcattttcaaatcagcaagaatggatttgctttctaaagctaatgctctcgaggat
ttgcttcgacaagtgattgacgaggctagtcataagcatggtggggctcgcccaactctt
gttctgtgtgctatgtctgcgagggttgatggctacaagactctcaaatggatagccgag
accaagcttggtctggtgactcagtgtttcttgaccaattccgccaatagaggaggtgac
cagtatcgggcaaatctcgccctcaagatcaatgcaaaagttggcggaagtaatgttgag
ctgatggatactggctactctttcttcaaaagagaggacgaggtcatgttcattggtgct
gacgtcaaccatcctgctgctcgagaccagacgagcccctccattgttgctgttgtgggc
actctaaactggcctgaagctaaccgttacgcagctagagtcattgcacagcctcgccgg
aaagaggagattgaaggatttggtgacgcgtgccttgagcttgttaaagctcattttcag
gccacaaagaaacagcctaacaagatcgttatcttccgtgatggtgtcagcgatggtcag
ttcgacatggttcttaatagtgagttgcttgatgtgaagcttacttttgggaggaacaac
tacttccccaagattactgtaatcgtggcgcagaaacgtcatcaaacccgtttcttccct
gctacacccaatgacgcaagtgacaagggaaatgttccttcaggtacggtggtcgatacc
aaagtcatccacccgtttgagtacgatttctacctctgcagtcaccatggaggcataggg
acaagcaagcccactcattattatgccctttgggacgaactcgacttcacttcagatcag
atgcagaagcttatcttcgacatgtgcttcactttcactcgctgcaccaaacctgtgtct
ctcgttcctccagtctactatgcggacatggtcgcatttagaggaagaatgtaccacgag
gcgagttcacgggagaagaacattaggcagccacgaggagcgcctcccccaccggccgat
tcactttctgctctgaccttggaggacaaagcaatattcaagttgcacaaggagcttgag
aacgttatgttctttgtctga
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