Brassica oleracea (wild cabbage): 106297456
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Entry
106297456 CDS
T04124
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 9-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106297456
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
boe01009
]
106297456
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106297456
03019 Messenger RNA biogenesis [BR:
boe03019
]
106297456
03041 Spliceosome [BR:
boe03041
]
106297456
Enzymes [BR:
boe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
106297456
Protein phosphatases and associated proteins [BR:
boe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
106297456
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106297456
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106297456
Spliceosome [BR:
boe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106297456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
106297456
NCBI-ProteinID:
XP_013589146
UniProt:
A0A0D3AFH1
LinkDB
All DBs
Position
C1:42316969..42318385
Genome browser
AA seq
318 aa
AA seq
DB search
MTTTMEAVMEISMVDDIIRRLLEGKGGKQVQLSEIEIRQLCVNARQIFLNQPNLLDLHAP
IRICGDIHGQYQDLLRLFEYGGYPPSAHYLFLGDYVDRGKQSLETICLLLAYKIRYPSKI
FLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSP
DLENWEQIREIQRPTEIPDNGLLCDLLWSDPDQKSEGWSDSDRGISCTFGADVVAEFLDK
NDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDQSLVCSFEILKP
APSSSGIPLKKVPKMGKS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacaatggaagcggtgatggagataagtatggtggacgatatcataagaaga
ttactagaaggcaagggaggcaaacaggtccagctctcagagatcgagatccgtcaactc
tgcgttaacgccagacaaatcttcctcaatcagcccaatctcctcgacctccacgccccc
attcgcatctgcggtgatattcatggacaataccaagaccttcttcggctattcgaatac
ggaggctaccctccttcagcacactacctcttcctgggagactacgtcgaccgaggcaag
caaagcctcgaaacaatctgcctcctcttggcttacaaaatccgctacccgtccaagatc
tttctcctgagaggcaaccacgaagacgccaagatcaacaggatctacggcttctacgac
gaatgcaaaaggagattcaacgtcaggctatggaagatattcacggactgcttcaactgt
ttgcccgttgctgctctcattgacgacaagatcctgtgcatgcacggcgggttgtctccg
gatttggagaattgggagcagattagggagattcagaggcctactgagattccagacaac
ggtcttctatgtgatttactttggtctgatcctgatcagaagagtgaaggatggtctgat
agcgatagaggtatctcttgcacgtttggagctgatgttgtcgctgagtttttggataag
aatgatcttgaccttatttgccgtggtcatcaagtagtggaagatggatatgagtttttt
gcaaaaaggagactagtgactatattctcagccccaaactatggtggagagtttgacaat
gcaggtgcattactgagcgtggaccaatctcttgtctgctcttttgagattctgaaacct
gccccatcttcaagcggtattcctctaaagaaggtacctaaaatgggcaagtcttga
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