Brassica oleracea (wild cabbage): 106298303
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Entry
106298303 CDS
T04124
Name
(RefSeq) RNA-binding protein 8A-B-like
KO
K12876
RNA-binding protein 8A
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03013
Nucleocytoplasmic transport
boe03015
mRNA surveillance pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106298303
09122 Translation
03013 Nucleocytoplasmic transport
106298303
03015 mRNA surveillance pathway
106298303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106298303
03041 Spliceosome [BR:
boe03041
]
106298303
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106298303
Spliceosome [BR:
boe03041
]
Complex C
Other components
EJC/TREX
106298303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
106298303
NCBI-ProteinID:
XP_013589859
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Position
C6:10677778..10679428
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AA seq
201 aa
AA seq
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MANIESEAIDFEPEEDDLMDEEEAGAADVSPRAAGHPRLRSAIAGANGDSTDRKTKGRGF
REERDSDRQRRLSSRDFESLGSDGGPGPQRSIEGWIILVTGVHEEAQEDDLSNAFGDFGE
IKSLHLNLDRRTGFVKGYALVEYEKSEEAQNAIKAMNGAELLTQNVSVDWAFSSGPNAGS
YRRKNLRSGRSQRSRSPRRRF
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacatagaatccgaagcaatcgatttcgagccagaggaggatgacctcatggac
gaagaagaggctggagcagctgacgtttccccacgcgccgctgggcatccgaggcttagg
tcagctatcgccggagcaaacggcgactcgacggataggaagaccaaaggccgcggcttt
cgcgaggagagagactccgatcgccagcgccgcctttcctcgcgcgatttcgagtcgcta
ggttccgatggcggtcctggcccgcagcgatctattgaggggtggattattttggtcacc
ggagttcatgaggaggcacaagaggatgatctatcgaatgcttttggtgattttggggag
attaagagtttgcatctcaatctcgatcgccgtactggttttgtcaagggctatgctttg
gtagaatatgagaagagtgaagaagcacagaatgctatcaaagcaatgaatggtgctgag
cttcttacacagaatgtcagcgttgactgggccttcagcagtggacccaatgctggatct
tacaggagaaagaacttgaggtctgggaggtcacaacgttcaagaagcccgagaagacgt
ttctga
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