KEGG   Brassica oleracea (wild cabbage): 106298303
Entry
106298303         CDS       T04124                                 
Name
(RefSeq) RNA-binding protein 8A-B-like
  KO
K12876  RNA-binding protein 8A
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03013  Nucleocytoplasmic transport
boe03015  mRNA surveillance pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106298303
  09122 Translation
   03013 Nucleocytoplasmic transport
    106298303
   03015 mRNA surveillance pathway
    106298303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106298303
   03041 Spliceosome [BR:boe03041]
    106298303
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106298303
Spliceosome [BR:boe03041]
 Complex C
  Other components
   EJC/TREX
    106298303
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 106298303
NCBI-ProteinID: XP_013589859
LinkDB
Position
C6:10677778..10679428
AA seq 201 aa
MANIESEAIDFEPEEDDLMDEEEAGAADVSPRAAGHPRLRSAIAGANGDSTDRKTKGRGF
REERDSDRQRRLSSRDFESLGSDGGPGPQRSIEGWIILVTGVHEEAQEDDLSNAFGDFGE
IKSLHLNLDRRTGFVKGYALVEYEKSEEAQNAIKAMNGAELLTQNVSVDWAFSSGPNAGS
YRRKNLRSGRSQRSRSPRRRF
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcgaacatagaatccgaagcaatcgatttcgagccagaggaggatgacctcatggac
gaagaagaggctggagcagctgacgtttccccacgcgccgctgggcatccgaggcttagg
tcagctatcgccggagcaaacggcgactcgacggataggaagaccaaaggccgcggcttt
cgcgaggagagagactccgatcgccagcgccgcctttcctcgcgcgatttcgagtcgcta
ggttccgatggcggtcctggcccgcagcgatctattgaggggtggattattttggtcacc
ggagttcatgaggaggcacaagaggatgatctatcgaatgcttttggtgattttggggag
attaagagtttgcatctcaatctcgatcgccgtactggttttgtcaagggctatgctttg
gtagaatatgagaagagtgaagaagcacagaatgctatcaaagcaatgaatggtgctgag
cttcttacacagaatgtcagcgttgactgggccttcagcagtggacccaatgctggatct
tacaggagaaagaacttgaggtctgggaggtcacaacgttcaagaagcccgagaagacgt
ttctga

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