Brassica oleracea (wild cabbage): 106298316
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Entry
106298316 CDS
T04124
Name
(RefSeq) TATA-box-binding protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106298316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106298316
03021 Transcription machinery [BR:
boe03021
]
106298316
Transcription factors [BR:
boe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
106298316
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106298316
RNA polymerase III system
TFIIIB
106298316
RNA polymerase I system
SL1/TIF-1B
106298316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Beta-Casp
Motif
Other DBs
NCBI-GeneID:
106298316
NCBI-ProteinID:
XP_013589872
UniProt:
A0A0D3CSF2
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All DBs
Position
C6:complement(14292246..14294722)
Genome browser
AA seq
200 aa
AA seq
DB search
MAEQGMEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKMREE
TYTAFENIYPVLTEFRKIQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaaggaatggaagggagccagccagttgaccttagcaagcatccttcaggg
atcgttccaactcttcaaaacattgtatcgacagtgaacttggactgcaagcttgatctt
aaagccattgctttgcaggctcgtaatgctgaatataaccccaagcgttttgctgcggta
atcatgaggataagagagccaaagaccacagcgttgatctttgcgtctgggaaaatggtg
tgtactggagctaagagtgaacatctttcgaagctggctgcgagaaagtacgctcggatt
gttcaaaagcttggctttcctgcaaagtttaaggatttcaagatacagaacattgtaggg
tcttgtgatgtcaaattccccatcaggcttgaaggtcttgcatactctcacagtgctttc
tcaagttacgagcctgaactattcccaggactgatatataggatgaaacaaccaaagatt
gtactccttatttttgtgtctggaaagattgttataaccggagccaagatgagagaagag
acttacaccgcctttgagaatatctacccagttcttacagaattcaggaaaatccagcaa
taa
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