Brassica oleracea (wild cabbage): 106298435
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Entry
106298435 CDS
T04124
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03030
DNA replication
boe03410
Base excision repair
boe03420
Nucleotide excision repair
boe03430
Mismatch repair
boe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106298435
03410 Base excision repair
106298435
03420 Nucleotide excision repair
106298435
03430 Mismatch repair
106298435
03440 Homologous recombination
106298435
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
boe01009
]
106298435
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boe03032
]
106298435
03400 DNA repair and recombination proteins [BR:
boe03400
]
106298435
Protein phosphatases and associated proteins [BR:
boe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106298435
DNA replication proteins [BR:
boe03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
106298435
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
106298435
MMR (mismatch excision repair)
DNA polymerase delta complex
106298435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
106298435
NCBI-ProteinID:
XP_013590015
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All DBs
Position
C6:38971781..38974282
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AA seq
484 aa
AA seq
DB search
MTHTETLNILDELESLVSDQLQVVSYKWLSRNFSISSKTAKSLLKDFVEKNGKGFEVVYI
VSGWLKNTPSDHRTRLVSSSKLSEVEKEFNGTHSVSIYSVQASIPMEPAAIWNSEFVQAE
ELFREPSAADNCLRDNRFCGISNSFVKRNIEGATANVTAPGTASVRTTVPSIPKVGYQAK
NETVTTAPAQKQPAKSSNDKEKSLPVPATKKNGQAQKSVTGTGGSLKNMWGRVPVKAEDT
SATIEVKNHDDSEAQKPSHGAEHKGGSDDEAPDVSIRNRKRKVIFDFSDEECEDVISLAS
PSSPKINPGPDSEETKDSGPENPDKRVSGPDEPEVSGEDWQKTTSADTSGVKKEEKPIAS
SKEKMQGNGSEAGVNPSKGRMTNAPSSPKRKKVLKTRIDERGREVTEVVWEDTETNTKKK
EDSDTSKKLNDGKSANAAVNRAVVQKKSPAMGAVNAGGKTGSKKGGNVKDPKQGNIMSFF
KKKV
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaccgaaaccctaaatatcctcgacgaactcgagtctctcgtctccgatcag
cttcaagtggtatcttacaaatggctgagtcgaaatttctctatttcatcaaaaactgcc
aagagcttgcttaaggatttcgtcgagaaaaatgggaaaggtttcgaagttgtttatatt
gtgtctgggtggctaaagaacactccttctgatcaccgcacaaggcttgtatctagttca
aaactttcagaagtggagaaagagttcaatggaactcactcagtttctatatacagtgtt
caagctagtattccgatggagccagcagctatatggaacagtgagtttgtgcaagcagaa
gaactcttcagggagccttctgccgctgataattgcttgagagacaacaggttttgtggc
atctccaattcttttgtaaagcgtaatatagagggagccactgcaaatgttacagccccg
ggaactgcaagtgtgagaactacagtgccttcaatccctaaggttggctatcaggctaaa
aatgaaactgttactactgctccagctcaaaaacagcctgcgaaatcctccaatgataaa
gaaaaatcccttcctgtgcccgctactaaaaagaacggtcaagcccaaaagagcgttact
ggaacagggggttcgttgaaaaatatgtggggccgtgtgcctgtgaaagcagaagataca
tctgcaacaatagaggtcaaaaaccatgatgactcagaagcccaaaagccttctcacggt
gcggagcacaagggaggcagcgatgatgaggccccagatgtcagtatcaggaacagaaaa
aggaaggtgatatttgatttttctgatgaagagtgtgaagatgttatcagcttagcatct
cctagcagtcctaagattaatccgggtccagatagcgaagaaaccaaagattcaggtccg
gaaaatcctgataaacgtgtatctggaccagatgaaccagaggtcagcggagaagactgg
caaaaaactacctctgctgatacttccggtgtcaaaaaagaggagaaacctattgcttca
tcaaaggagaagatgcagggaaatggttctgaagctggagtcaatccgtcaaagggaaga
atgactaatgctcctagttcaccgaaaaggaaaaaagtgttgaagacgaggattgatgag
cgtgggagagaagtaactgaggtagtctgggaggatacagaaacaaacacaaagaagaaa
gaagacagtgatacgagtaagaagttaaatgatggcaaaagcgcaaatgctgctgttaac
agggctgttgttcagaagaagagcccggccatgggagctgtaaacgcaggagggaaaaca
ggaagcaagaaaggagggaacgtgaaagatccaaagcaagggaacataatgtctttcttc
aagaagaaagtctaa
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