Brassica oleracea (wild cabbage): 106299413
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Entry
106299413 CDS
T04124
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106299413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106299413
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106299413
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106299413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Myc_N
BKRF4
zf-RING_5
Nop14
zf-C3HC4_2
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
106299413
NCBI-ProteinID:
XP_013590961
LinkDB
All DBs
Position
C6:complement(32030655..32031981)
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AA seq
339 aa
AA seq
DB search
MPPPPRNPDHRSPKRPRFPPPPPVPEEEEEEEEEDDDEFSDISADDEEDCSDESADDEED
DVEVVAVVTVAEAQSRRYVGSSSSTSSPVKLNSSEILDCPTCLEPLRGPIYQCVNGHITC
SPCLPRVYKQCPVCRIPIGNIRCRAMEMVIESSAVPCRYAIYGCKETTLYGDQAHEKVCP
YIRCQCPVTNCSYTGGYKEVEAHARLQHSWDVEHLIPFVFNTPQIFSINLARTSRAVFQE
EKEGDMIVVQTFKRTNGGVCVTVSHIAPLSLGVRNLSCSLAKLNAYTTLRLGVMVKKIQK
LREQEEPREDFLFIPDYMLSDNHLKMQICVGSEFKYVHI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcccccgagaaaccccgaccaccgttccccgaagaggccacggttccctcct
cctcctcccgtccctgaagaggaggaagaagaagaagaagaagacgacgacgagttcagc
gacattagtgccgatgacgaggaggattgcagcgacgaaagcgccgatgacgaagaagat
gacgtcgaagtagtcgctgtcgttacggtagcggaggctcaatcgagaagatacgttggc
agcagcagcagcactagctcccccgttaagctgaacagctctgagattctcgactgtccc
acttgcttagagccactcagggggcccatctatcagtgtgtgaatgggcatataacttgt
tctccgtgcctccccagagtctataagcaatgccctgtctgtaggatacccatcggtaac
atcagatgcagagccatggagatggtcattgaatcatctgctgtcccctgtcgttacgcc
atctacgggtgtaaagaaaccacgttgtatggggaccaagcacatgagaaggtgtgtccg
tacatccgttgccagtgccccgtaacgaactgcagctacaccggcggctacaaggaggtc
gaagcccacgctcgtctccagcactcttgggacgtggaacacctcatcccgttcgttttc
aacacccctcagatatttagcatcaacctggctaggaccagtagggcagttttccaggaa
gagaaagagggtgatatgattgtggtccagactttcaaaaggacgaacggcggcgtttgt
gtgaccgtgagccatatcgcgcctttgtctcttggagtacgcaacctctcgtgcagtctt
gctaagctcaatgcgtataccacactgaggcttggggtgatggtgaagaaaatccagaaa
ctgagagagcaggaagagcccagagaggacttcctgtttattccggattatatgttgagt
gataatcacttgaagatgcagatttgcgttggaagtgaatttaagtatgttcatatctga
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