Brassica oleracea (wild cabbage): 106299574
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Entry
106299574 CDS
T04124
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106299574
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
boe04040
]
106299574
Ion channels [BR:
boe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106299574
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
DUF6525
Motif
Other DBs
NCBI-GeneID:
106299574
NCBI-ProteinID:
XP_013591102
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All DBs
Position
C1:23608397..23614566
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AA seq
762 aa
AA seq
DB search
MVSPNKNDKIHILPISDASSSSSQTRVFTSRTRSVPLSNPTDETGNSNAVTLGYAGSLLS
QRPPLVPMTGPLSSSTRRPEPLFPRPAPPPTRRSSGYFGDLEEVNSSDNDELLKHAHRLR
SGKLGMCNDPYCTTCPSNYNPKASRLPNPTVSASTFHNALYDDARSWARRFASSVNRCLP
GIMNPHSKVVQIWTKFFAVSSLLAIFIDPLFFFIILVQKNNKCVVIDWPIATAFVIFRTL
TDVIFFANMLLQFRLAYVARESTVVGAGQLVDRPKKIALHYFRGYFIVDLIIVMPFPQVL
VLSVIPAQLAISGTNYAKNLLRAGILVQYIPKLYRLLPLLAGQTPTGLIFESAWANFVIN
LLTFMLAGHVVGSCWYLFGLQRVNQCLRNACGHSGRECRGLIDCGHGNSNISASLRAIWR
NSASANACFQEDGFSYGIYLKMVNLTTHTSLLTRYSYSLLWGFQQISTLAGNQVPSYFFP
EVVFTMGIIGLGLLLFALLIGNMQNFLQSLGKRSLEMTLRRRDVEQWMSHRRLPEGIRKR
VREAERFNWAATRGVNEELLFENMPDDLQGDIRRHLFIFLKKVRIFSLMDESILDSIRER
LRQRTYISGSTVLHRWGLVEKIVFIVRGEMESIGEDGSVLPLSEGDVCGEELLTWCLERS
AVNLDGRMLSKGLLSSRNVKCVTNVEAFSLSAADLEDVTSLLFLRSHRVQGAIRYESPYC
RLRAATQIQVAWRYRKRQLRKLSTAQKKQYSLELIKKDMAKT
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggtttccccaaacaaaaacgataagattcacattcttccgatttcagacgcatcgtca
tcttcatctcagactagggttttcacttccaggactcgtagcgttcctctctcaaaccct
actgacgaaactggcaactcgaatgctgtgactttaggctacgcaggttctcttctgagc
caacgtcctcctttagtcccaatgactggccctctttcctcttctactcgtagacctgaa
cctctcttccctcgtcctgctcctccccctactcgaagatcttctggctattttggtgac
ctggaagaggtaaactcctcagacaacgatgagttattgaaacacgcacatcgcctgaga
tctggaaagttggggatgtgtaacgatccttactgtaccacttgcccttctaactataac
cccaaagcatcccggcttcccaatccaactgtttctgcttccacgttccataatgccttg
tatgatgatgctagaagttgggctaggcgatttgcttcttctgttaatagatgcttacct
ggaatcatgaatcctcattccaaagtcgttcaaatatggactaagttctttgccgtctca
agcttgttagccatttttatagaccccctcttcttcttcatcatattagtccaaaagaac
aacaaatgcgtagtgattgattggccgatagctaccgcatttgttatttttagaactctg
acggatgttatattctttgctaacatgctgcttcagttccgactggcatatgtagctcgt
gagtctacggtagttggtgctggccagttggttgatcgtcccaaaaaaattgctctccat
tactttcgaggatattttatcgtagacctgatcatagtgatgccatttccacaggtattg
gtactatcggtaataccagcacagttagccatatccgggacaaactatgcgaaaaacctt
ttacgtgctggaattcttgtccaatacattccaaagctatatagacttctaccactgctt
gctggacaaacaccaacaggcctcatatttgagtcagcttgggctaactttgttattaat
cttctcacctttatgcttgctggacatgttgtcggctcttgctggtatcttttcggtttg
cagagagttaaccaatgccttcgaaatgcttgtggtcattctgggcgtgaatgtagaggt
cttattgattgtggccatggaaatagtaatatatcagcatccctacgagctatctggaga
aatagtgcgagtgcaaatgcttgtttccaagaagatgggttttcttacggaatatatttg
aaaatggtcaatcttacaactcatactagtctcttgacaagatatagttactctttgcta
tggggatttcagcaaattagcacgcttgctggaaaccaagtcccaagctactttttccct
gaggtcgtttttactatgggtatcatcggactgggacttttgcttttcgcgcttcttatt
ggtaatatgcaaaacttccttcagtctctcggtaaaaggagcttggaaatgacgctaaga
cggcgtgatgtagagcagtggatgagccatagacggttgccagaagggataagaaagagg
gtgcgagaggcagagcgtttcaattgggctgctaccagaggagttaacgaagagttgctc
tttgagaatatgcctgatgaccttcaaggagatataagaagacacctcttcatatttctc
aagaaagtaagaatattttcgttgatggatgaatcaattttagactcaatacgtgagagg
ctgagacagaggacatacataagtggtagcacagtcttgcaccgctggggtctggtggag
aaaatagttttcatagtgagaggtgagatggagagcattggagaagacggttctgttctt
cctctatcagaaggagacgtttgtggtgaagaacttctcacttggtgccttgaacgctct
gctgtaaacctcgatgggaggatgctttccaagggattgcttagcagcagaaatgttaag
tgtgtgacaaacgtggaggcgttttcgctgagtgcagcagaccttgaggatgtaacgagc
ttgttattcttaaggagccatcgagtccaaggagccataaggtacgagtctccttattgt
aggctacgagcagctacgcagattcaagtggcttggagatacagaaagagacagctccgg
aagttaagcactgctcaaaagaaacaatattcgttggagttaatcaaaaaagacatggcg
aaaacatag
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