Brassica oleracea (wild cabbage): 106299644
Help
Entry
106299644 CDS
T04124
Name
(RefSeq) nuclear-pore anchor-like
KO
K09291
nucleoprotein TPR
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106299644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106299644
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106299644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
106299644
NCBI-ProteinID:
XP_013591156
UniProt:
A0A0D3CVU3
LinkDB
All DBs
Position
C6:24952706..24965759
Genome browser
AA seq
2077 aa
AA seq
DB search
MPLFMPDDELARLSNDAASVVAERADEYIRKLYAELDSVRAKADAASITAEQTCSLLEQK
YLSLSQDFASLESQHAKLQSDLDDRLSELAQSQAQKHQLHLQSIEKDGELERMTTEMSEL
QKSKRQLMELLEQKDSEISEKNSNIKSYLEKIVKLTDASSEKESRFAEASAELARSQAMC
FRLSQEKELMERHTKWLDEELTSKVDSYAELRRRHSDLEAEMSAKLVDVEKNYNECSSSL
NWHKERLRELETKITSLQEELSSCKDAATTTEEQYSAELLTANKLVELYKESSEEWSRKA
GELEGVIKALEARLSQVESGYKHRLEKEMSTNQKLEKENEDIKQKLEKCEAEIEKTRKTD
ELTLIPFSSFTRGVDISGTSNMIVESHEIISKVPAGVSGTALAASLLRDGWSLTKIYEKY
QEAVDAMRHEQLGRKEAELILQRVLSELEEKAGFIQEERGEHERLVEAYSLVSQKLQDSV
SEQSNMEKVIMELKADLRRRERENILYQKDISDLQKQVTILLKECRDVQLRCGAAGDEEE
DDTQLSDVEMDMESEADKIISEHLLKFKNINGLVEQNVKLRNLVRSLSEQIESRETELKE
KYEIDLKKKTDEASSKVAIVLERAEDQCKMIESLHASVAMYKRLYEEEQKLHSSNSLSSD
PPPDVVPGRKNFLHLLEDSQEATKRAQEKTFERIRSLEEDLAKARSDIIAIRSERDKLAM
EANFAREKLEGIMKESERKREEMNSVLARNIEFSQLIIDHQRKLRESSESLHAAEGISRK
LSMEVSVLKQEKEVLSNAEKRASDEVSALSQRVYRLQATLDTIQSTEEVREEARAAERRK
QEEHIKQLEKEWAEAKKELQEERSNARNSTSDRNQTLNNAVRQVEEMGKELANALKAVSA
AESRASVAEARLSDLEKKIRSSDPKVRDMESGGVVSLSDNEISIDLHTAKEEMEKLRGEV
ESSKSHMLQYKSIAQVNETALKQMESAHENFRIEAEKTQKSLEAELVSLRERVSELENDC
IQKSEQIANAAAGKEDALVSASAEIASLREESLVKSSQIEAINIQMSILKNDLEKEHEKW
RVAQRNYERQVILQSETIQELTKTSQALASLQEEASELRKLADARGTEISELTSKWSEEK
FMLEQQKNLAEKKYHDLNEQNKILHSRLEAMHLHSAEKDSRSGKISSESTGSDQLGDSGL
QSVVNYLRRTKEIAETEISLMRQEKLRLQSQLESAVKMAESARGSLNAERSSSRASLLTE
DEIKSLQLQVNEMNLFRESNMQLREENKHNFEECQRLREVSQKARTDFENSENLLKQKQT
ELDLCMKETERLRKEIDLQKRRVDELRETYKNIDVADYNRLKDEMRQFEEKLKGKDAHIE
EIKKLVLEKENKISLLEKDLTNCKNELREREKDRTKCKTELSEREKRLDAAQQAQVTMQS
EIENLKAEITKLKGDSERLRKSFTNIKRKLDKEKDDLNRENQSLSKQLEEAKEAGKRTTS
DATAEQAVKERDEKEQKIQILDKFVHSLKDDLKKKDDELTKEKTERKSVEKVFGDSLAKI
KQEKTKVDEELVKLERYQTALARLSEELDKLKQADGNLPEGTSAVQALSGSVLNDQAAAY
VSAVDYFERMARTIVHNSQGSTKSTGTVTEASPATVEPSAIVKASPSKAPVETTQQPPKE
KRLVSLKPSAELRRPVRRIKRPQFIKPEEPPQADVEMPEAEGAGDEGKQPSSNVTESQVT
TMPPPFQTHIRKRQADPLASEPQQGTRETSSEIAPPAPKKPKGSESQPDTTESETLPKEP
DVDESMDATTAAEDDNEEETEAETAEEKTEETTEAQQESEAEVQEKADEPVEENPTETET
IPTEEEFKDQTEQENQDLLADVEFDKEEGEFDLDTLEDLEEAKDVITPTQSPIRIEKSTE
EAETTIEPALEDAKNDEGAAEEASDKPDNGHNQQVEETDLKPETTIATTVTASTSSTPAS
ASPSETQETEETKRAASPSRTINIADKAKEQAALRQAGVATLGGTRTPSPGNRAASSSLL
RGRGRVVNTRGGNRLNTRGGRTPRGGGAGRGQPPSQP
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgtttatgccagacgatgagcttgcgcggctatcaaacgacgccgcgtcggtg
gttgcagagagagccgacgagtacatccggaagctgtacgccgagttggacagtgtacgt
gccaaggccgatgctgcttccatcacggcggagcagacgtgctcgcttctcgagcagaag
tacctctcgctctctcaggatttcgcgtcgcttgaatctcagcatgcgaagcttcagtct
gatctcgatgatcggttatctgagctcgcacagtctcaggcgcagaagcaccagcttcat
ttgcaatcgattgagaaggacggagagttagagaggatgacgacggagatgtcagagctg
caaaagtccaagaggcaactgatggagttgctggagcagaaagattctgagattagcgag
aagaactctaatatcaagagctatttggagaagattgttaagctgactgacgctagttcg
gaaaaggagtctagatttgctgaagcaagcgctgaattggcacgttcgcaagctatgtgc
tttcgtttgtctcaggagaaagagcttatggaaaggcatactaagtggcttgatgaggag
ttaacatctaaagttgacagttatgctgaactccgtaggaggcattctgatctcgaggct
gaaatgtcggcgaagcttgtggacgttgagaaaaattataatgaatgctctagttcgttg
aattggcataaggaaagattgagagagctcgaaacgaagattacttcattacaagaggaa
ctcagctcgtgcaaagatgcagcaacgacgactgaagagcaatacagtgctgaacttctc
actgcaaacaagcttgttgagctgtacaaggaaagttcggaggaatggtctagaaaggct
ggggaacttgagggtgtcattaaggccttagaggcacgcttgagccaagtcgagagtggg
tataaacatagacttgagaaagaaatgtctacgaaccagaagttggagaaggagaacgaa
gacattaaacaaaaacttgagaagtgtgaagcagaaattgagaaaactcgaaaaacagat
gagctaacgcttatacctttcagcagtttcacaagaggggttgacatttctgggaccagc
aacatgatagtggaaagccatgaaataatttccaaggttcctgctggtgtgtcaggaaca
gcactggcagcttcactcctacgtgacggatggagtctgaccaaaatttatgagaagtat
caagaggctgttgatgctatgaggcatgagcaattaggtcgaaaggaagcggagttgata
ctacaacgggttttatccgaactagaagagaaagctgggttcatccaagaggaaagaggt
gagcatgagcgtttggttgaagcttactctctagtcagtcaaaaacttcaggattctgtc
tctgaacaatcaaatatggagaaagtcatcatggagctaaaggctgacttgaggaggcgg
gaacgtgaaaatattctgtatcagaaagatatatctgacctacagaagcaggtaacgata
ctactgaaggagtgtcgtgatgtccaacttcgctgtggagctgccggggatgaggaagaa
gatgatactcagctttctgatgttgagatggatatggaatctgaagctgataaaataatt
tcagagcatcttttgaagtttaaaaatataaatggattagttgagcagaatgttaagctc
aggaatcttgttcgtagtctctcagagcagattgaaagtagggaaacggagctgaaggag
aagtatgagatagacctgaagaaaaagactgatgaagcttcttccaaagtagccatcgtg
ctagaaagagccgaagaccagtgtaaaatgattgaatcactgcacgcatctgttgcaatg
tataaacgactatatgaagaggaacagaaacttcattcatctaattctctttcttcagat
ccgcctccagatgtagtgccaggaaggaagaacttcttacatctgcttgaggattcgcag
gaagctactaagagagcccaagaaaaaacatttgaacgcattcgaagtctggaagaagat
ttagcgaaggctaggagtgatataattgcgataaggtctgaacgggataagttggccatg
gaggcaaattttgctagggaaaaactagaaggcatcatgaaagaatctgaacgcaagagg
gaagaaatgaacagtgttttggcaagaaacatagagttctcgcagctgatcatcgaccac
caacggaagttacgtgagagttctgagtctctgcatgcagcggaagggatttctagaaaa
ttatctatggaggtatcggttcttaaacaagaaaaagaggtgttatcaaatgctgagaaa
agagcctctgatgaggtttctgctttatctcagagagtttatcgccttcaggctaccttg
gatactatccagagtacagaggaagttcgtgaggaagcaagagctgccgagagaaggaaa
caagaggagcatatcaagcaacttgagaaagaatgggctgaagctaaaaaagaattgcaa
gaagaaaggagcaatgcgcggaatagcacttcggaccgcaatcaaactttgaacaatgct
gttaggcaggtcgaagaaatggggaaagaattggctaatgccttgaaggctgtctcggca
gcagagtccagggcttctgtggctgaggctagactttctgatttggagaagaagataaga
tcttcagatcctaaggttcgtgatatggagagtggtggagtcgtctctctttctgataat
gagatatccatagacctgcatactgctaaggaagaaatggaaaagttgaggggagaagta
gaatctagcaaaagccacatgcttcagtacaagagtatagctcaggtgaatgaaacagct
ttaaagcagatggaatctgcccatgagaacttcagaattgaggctgaaaagacacagaaa
tcgttggaagcagagcttgtttctcttagggaaagggtttcagaacttgaaaacgactgt
atacagaaatcggagcaaatagccaatgctgctgcaggaaaagaagatgctcttgtatca
gcatcagctgaaattgcaagcctgagagaagaaagcttagttaaaagttcccaaatcgaa
gcaattaatatccagatgtccattttgaaaaatgacctggagaaggaacatgagaaatgg
cgtgttgctcagagaaattatgaaagacaggttattctgcagtctgaaactattcaagag
cttacgaaaacatcacaggctttggcttcccttcaagaggaggcatctgaacttcgtaaa
ttggctgatgcaaggggaacggaaatttccgagcttacctccaagtggagtgaagagaaa
tttatgttagagcagcaaaagaatctagcggagaagaagtatcatgatctcaacgaacag
aacaaaatactgcatagccgacttgaggctatgcatcttcactcggctgagaaagatagc
cgttctggaaaaatatcatctgaaagcactggctcagatcaacttggagattctggtttg
caaagtgtagttaattatttgcgcagaacgaaggaaatagctgaaacagagatatcactt
atgagacaggaaaaattacggttgcaatcgcaacttgagagtgccgtgaagatggcagag
tctgcccggggttcacttaatgctgagcgttccagttcaagggcctcattattgactgag
gatgaaatcaaatctcttcagcttcaggtcaatgagatgaacttgttccgtgaaagcaac
atgcaactcagggaggaaaacaaacacaattttgaggagtgccagagactgcgtgaagta
tctcaaaaggctaggacagatttcgaaaactcagaaaatctattgaagcaaaagcaaacg
gagttagacttgtgtatgaaagagacggaaaggctaaggaaggagatagatcttcaaaaa
aggagggttgatgagttgcgagagacgtataaaaacattgatgttgctgactacaatcgc
ctcaaagatgaaatgcggcaattcgaggagaaactgaaagggaaagatgctcatattgag
gaaatcaagaagcttgtgttagagaaggagaataagatatctctactagagaaggatcta
acaaactgcaaaaacgaactgagagagagggagaaggatcgaacaaaatgcaaaacagaa
ctgagtgagagggaaaagaggttagacgctgctcagcaagcacaggtgactatgcagtca
gagattgagaatttgaaagcagagattactaagctgaaaggagattccgaaaggttgaga
aaatcttttactaacattaagagaaagctcgataaagaaaaggacgacttaaacagagaa
aaccagtcgctctctaaacaattagaggaagccaaagaggctggaaagagaacaacatct
gatgccacggcggagcaggccgttaaggagagagatgaaaaagaacaaaagattcagata
ttggataagtttgttcattcactgaaagatgacctgaagaagaaagatgacgaattaact
aaagagaaaacagaacgcaagtctgttgagaaagtatttggagactccttggccaaaatt
aaacaggagaaaacaaaagtggatgaagagcttgttaagctcgagaggtatcagacggca
ttggctcgactctctgaagaattggacaagttgaagcaagctgatggaaatctgcctgag
ggtacttcagctgtccaggctctctctggaagcgtattgaatgaccaagccgctgcgtac
gtatcagctgtagactattttgaacgcatggctcgtactattgtccacaattctcaaggt
agcacaaaatctactggtacggtgactgaagcttcccctgctacagttgagccttcagcc
attgtcaaagcctctccttcaaaagctccggtggaaactacccagcagccacccaaagag
aagagattggtttcgctgaaaccaagcgctgagctccgcagaccggttaggaggattaaa
cgtcctcaatttattaaaccagaggaacctcctcaagctgatgttgagatgccagaagct
gagggagctggtgatgaaggaaaacagccttcctccaatgttacagagagccaagtaacc
acaatgccaccaccttttcagacacatatccgtaaacgccaggccgatccattggcttct
gagccacaacaagggactcgggaaaccagttcagaaattgcaccacctgcgccgaagaag
cctaaaggatctgagtcacaacctgatactaccgaaagtgaaaccctccctaaagagcca
gacgtggatgaatccatggatgcgactactgccgctgaggatgacaatgaagaagaaaca
gaagccgagactgcagaggagaaaacagaggaaactacggaagcacaacaagaaagtgaa
gctgaagtccaagagaaagctgatgagccagtagaagagaatccaactgagacagaaacc
attcctaccgaagaagagtttaaggatcagaccgaacaagagaatcaagatcttctggca
gacgtggaatttgataaagaagaaggagagttcgatctagacactctggaagatctcgaa
gaggccaaggatgtaattacacccacgcagtcaccaattaggatagagaaatcaacggag
gaagctgaaacaaccattgaaccagcactagaagatgctaagaacgatgaaggagctgct
gaagaagcctctgataaacccgacaatggtcacaatcaacaagtagaagaaaccgatctc
aagccagagaccacaatagctacaactgtcacagcatccacttcctctactccagcttct
gcaagtccaagcgaaactcaagaaactgaagaaacgaagagagcagcgtcgccaagcaga
actattaatatagctgataaagcaaaagagcaagcagctctaagacaagccggagtagcc
actctaggtggaacccgaactccttcaccaggcaaccgagctgcttcatcatccctcctc
agaggtcgtggccgagttgtaaacactcgaggaggaaatcgactgaatactcgtggtggc
cgaaccccacgtggtggtggtgctggacgtggacaacccccgagccagccgtga
DBGET
integrated database retrieval system
