Brassica oleracea (wild cabbage): 106299874
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Entry
106299874 CDS
T04124
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106299874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106299874
Membrane trafficking [BR:
boe04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
106299874
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Gene cluster
GFIT
Motif
Pfam:
Sec1
TPT
EamA
UAA
Sec20
Motif
Other DBs
NCBI-GeneID:
106299874
NCBI-ProteinID:
XP_013591337
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Position
C6:25846597..25860837
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AA seq
480 aa
AA seq
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MVHELIGLQDNKVDLRSIGSLPKDQQEVVLPSEQDAFFKSNMYLGILEMNIKRMLDDFQQ
VAKSNQNIQTVEEMARFVDNYPEYKKMQGNVSKHATLVTEMSKLVEARRLMLVSQTEQDL
ACNGGQGAAYEAVTDLLNNESVSDIDRLRLVMLYALRYEKENPVQLMQLFNKLASRSPKY
KPGLVQFLLKQAGVEKCTGDLFGNRDLMNLARNMARGIKGVENVYTQHQPLLFQTMESIT
RGRLRDVDYPFVGDHFQQGRPQEVVIFMVGGTTYEESRSVALQNATNSGIRFIFGGTALL
NSKSINTVYYMAAFATMILAIPVLLREGNGIMSWFEAHPSPWSAVIIIFSSGVLAFCLNF
SIFHVILSTTAVTFKVAGNLKVVVAVLVSWLIFRNPISYMNAVGCGITLVGCTFYGYVRH
MLSPGTPRTPRTPRNKMELLPLVNNDKLVGKVYSVFTIHCYVTSSPILDSENTICFSPIC
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgaactcataggacttcaggataataaagtggacttgagatccatcggaagt
cttccaaaagatcagcaagaggtggttttaccatcagaacaagatgcattcttcaaatct
aacatgtatttggggatattggaaatgaacatcaagagaatgctagatgactttcagcag
gtggcaaagagtaaccagaatatccagacagtagaggagatggccagatttgttgacaac
taccctgagtacaaaaaaatgcaaggcaacgtctcaaagcatgcaaccctggttactgaa
atgagcaagctagttgaagcaaggagactgatgctggtttcacaaacagagcaggacttg
gcttgcaatggtggccaaggagctgcatatgaggcagttacggatctcttaaataacgaa
agtgtgtctgacattgaccggctacgtttggtaatgctgtatgctctgcgctatgagaaa
gagaatcccgttcagttgatgcaacttttcaacaaattggcttcacggtctcccaagtac
aaacccgggcttgttcagtttctattgaagcaagccggtgtggaaaagtgtactggtgat
ctatttggaaacagagaccttatgaatttagcacgcaacatggctcgtggaattaagggg
gttgagaatgtatacactcaacatcagcctcttctgtttcaaacgatggagagcataacc
agagggagactacgagatgtggactacccttttgttggagatcattttcaacagggacgg
ccacaagaggtggtgatattcatggttggtggaacgacgtacgaggaatcgcgctctgtt
gctctacaaaacgccaccaactcaggcattcggtttatttttggcggcaccgcattgctc
aattccaaaagcataaacacagtatactacatggcggcttttgccaccatgatccttgcg
ataccggtattactacgggaaggcaacgggattatgagctggtttgaagcacatccgtct
ccgtggtcagccgtcatcatcatcttcagttctggtgtgttagccttctgtctcaacttc
tccatcttccatgtcattctctccacaactgcagtcacattcaaggtagctggaaacctc
aaggttgtggtggctgtattggtatcatggttgatattccgcaacccaatatcgtatatg
aatgctgttggatgtgggatcacgcttgtgggctgcacattctatggatacgtgaggcat
atgctttcacctggaactcctaggactcctcgtacaccaagaaacaagatggagttgctt
cctcttgttaataatgataaactcgtaggcaaagtctactcagtattcactattcactgc
tacgttaccagcagtccaatccttgattcggagaacaccatttgtttttctccaatctgt
tga
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