Brassica oleracea (wild cabbage): 106300038
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Entry
106300038 CDS
T04124
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNL1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106300038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106300038
Membrane trafficking [BR:
boe04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
106300038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Caleosin
Motif
Other DBs
NCBI-GeneID:
106300038
NCBI-ProteinID:
XP_013591541
UniProt:
A0A0D3CSZ5
LinkDB
All DBs
Position
C6:complement(16421243..16426535)
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AA seq
1447 aa
AA seq
DB search
MGHQNHHPSGSNSFHGGEFKSCHSKPSKVAVASMINSEIGAVLAVMRRNVRWGVRYIGDD
DQLEHSLIHSLKELRKQIFLWHANWQNVDPKLYIQPFLDVILSDETGAPITGVALSSVYK
ILTLDVFTLDTVNVGEAMHIIVDALKSCRFEVTDPASEEVVLMKILQVLLACIKSKAANG
LSNQDIFTIINICLRVVHQSTSKSELLQRLARHTMHELVRCIFSQLPYISPLANETELNV
GDKVGTVDWDQKSRESKVVNGNIDSVSVTLGTDKDPRSSEMVAPETELNNDEKGTEVSDD
LNVAANGESAMLAPFGIPCMVEIFHFLCTLLNVGESGEVNSRSNPIAFDEDVPLFALGLV
NSAIELGGSSFREHPKLLSLIQDELFCNLMQFGMSMSPLVLSTVCSIVLNLYLSFRTELK
VQLEAFFSCVLLRIAQSKHGSSYQQQEVAMEALVDFCRQHNFMAEVFANFDCDITCSNVF
EDVSNLLSKSAFPVNGPLSAMHILALDGLISMVQGMAERVGEELPASDVPTHEEGYEAFW
TVRCENYGDPNLWVPFVRKSKHIKKRLMVGADHFNNDPKKGLQQLQALHLLPEELDPKSV
ACFFRYTCGLDKNLIGDFLGNHDQFCVQVLHEFAKTFDFQNMNLDNALRLFVGTFRLPGE
SQKIQRVLEAFSERYYEQSPQILIDKDAALLLSYSIILLNTDHHNTQVKKKMTEEDFIRN
NRCINGGADLPREYLSELYHSICDSEIQMIPDQGTGFQMMTSSRWISVIYKSKETSPYII
CDSTSHLGRDMFHIVYGPTIAATSVVFEQAEQEDVLQRCVDGFFAIAKLSAYYHLNRVLD
DLVVSLCIFTPFFASLSVDEAVLALGEDARARMATEALFLIANKYGDYISSGWKSIVECV
LSLHKLQILPAHIASDAADDPEPSTSNIEQERPLANPVSVVSQAQPSAAPRKSSSFIGRF
SQLLSFDMEEIEPLPTEEELAAYKLARGIVKDCHIDSIFSDSKFLQAESLQQLVSSLIKA
AAKDEASAVFCLELLIAVTLNNRDRILLIWQTVYEHISGIVQSTTTPCPLVEKAVFGVLK
ICQRLLPYKENLTDELLKSLQLVLKLDARVADAYCEPITQEVARLVKANASHVRSHVGWR
TIISLLSITARHPEASDAGFEALRFIMSEGAHLLPSNYILCLDAARQFAESRVGEIDRSI
SAIDLMSNSVFCLARWSQEAKKSVGEDEAMMKLSQDIGEMWLRLVNNLKRVCLDQRDQVR
NHAILMLQRSVAGADGIMLPQPLWFQCFDSAIFPLLDELLAVSVENSRKTFKKTVEETLV
LATKLMSKAFLQSLQDISQQPSFCRLWLGVLDRMGTYMSTKFRGKRSEKVHELIPELLKN
TLLVMKTTGVLLPGDDIGSDSFWQLTWLHVKKISPSLQSEVFPQEELDQFQRRNAKPEDT
PPEMGVE
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggggcatcagaatcatcatccttcgggaagcaactcgttccatggaggagagttcaag
agttgtcactccaaaccgtccaaggttgctgtggcgtccatgatcaattccgagattggc
gcagttttggctgtgatgaggaggaatgtgcggtggggtgttcgctacattggagatgat
gatcagttggagcattctcttatccattctttgaaagaactgcgtaaacagatatttttg
tggcatgccaattggcaaaacgttgacccaaagctctacatacagccgtttctggacgtc
atactatctgatgaaactggggctcccatcactggcgttgctttgtcctctgtctacaag
atcttaacccttgacgtctttacacttgataccgtgaatgtgggagaggcgatgcatatc
atagttgatgctctgaaaagctgtcgtttcgaggtaactgatcctgcctccgaggaagtg
gttctgatgaagatacttcaagttcttcttgcttgtatcaagagtaaggcagctaatggg
ttgagtaatcaagatattttcaccatcatcaacatttgcttgcgtgttgttcatcaatca
acctccaaaagtgaattgttgcagcgtctagcgcgacacactatgcatgagttggtcagg
tgtatcttctctcagcttccttatatcagcccgctagctaatgaaaccgaattaaatgtc
ggtgacaaggtgggaacagtggactgggatcagaaatctagagaaagcaaagttgtaaat
ggaaatattgatagcgtatctgttactctcggcactgacaaagatcctcgaagttctgag
atggttgctccagaaacagagcttaataatgatgaaaagggaactgaggtcagtgatgac
ttgaatgttgctgcgaatggtgaaagtgcaatgttggcaccttttggtattccatgcatg
gtagagatttttcatttcttgtgtactctgttgaatgttggagaaagcggtgaagtcaat
tctaggtccaaccctatcgcatttgatgaagacgttcctcttttcgctctgggtttagtt
aattccgctatagaacttggaggctcttctttccgtgagcacccaaagttgctgagttta
attcaggatgagttattctgtaacttgatgcagtttggtatgtcaatgagccctctggtt
ctttctacagtttgcagcatcgtccttaatctctacctgagtttccgtactgagcttaag
gtgcagcttgaagctttcttctcatgtgtacttctgagaattgcacagagcaaacatggc
tcttcttaccagcaacaggaggttgctatggaagctctagttgatttttgcagacaacat
aatttcatggctgaagtgtttgcgaattttgattgtgatataacctgcagtaatgtgttc
gaagatgtttcaaacttgctatcaaagagtgcattcccagtgaatgggcctttatcagct
atgcatatacttgcgttggatgggttaatttccatggttcagggaatggctgaaagggtt
ggtgaggaattgccggcgtcagatgttcctacacacgaagaaggatatgaagcattttgg
acagtgagatgtgagaactacggagatcctaacttatgggttccctttgtccgtaagtca
aagcacatcaagaaaaggctgatggttggggctgatcattttaacaatgatcctaaaaag
ggtctgcaacaactccaagcgttgcacttgctgccggaggaacttgatccaaagagtgtt
gcgtgcttcttcaggtatacatgtgggttagataagaatcttataggagatttcctggga
aatcatgaccagttctgtgttcaggtgcttcatgagtttgccaagacgtttgacttccag
aacatgaatcttgataatgctctgcgtctctttgtgggtacatttagattgcctggcgag
tcgcagaagatacagagggtgcttgaggcgttttctgagagatactatgagcagtcgcca
cagatactgattgataaagatgctgccctcttgttatcttactcgataatcttgctgaac
acagatcaccacaacacgcaagttaagaaaaagatgactgaagaagatttcatccgtaac
aacaggtgcataaacggaggcgcagatcttcctagggagtacttatctgagctgtatcat
tcaatctgcgacagtgagattcagatgatcccagatcagggaaccggtttccaaatgatg
acatcgagtcggtggattagtgtgatttacaagtccaaagaaaccagcccctatatcata
tgtgacagcacatcgcatctgggccgtgacatgtttcatatcgtgtatggtccaactatt
gcagctacatcagtggtttttgagcaagcagagcaagaagatgttttacagagatgtgtt
gatgggtttttcgccattgcaaaactttcagcgtactatcatttgaatagggtattggat
gatctggttgtgtctctctgcatattcacgccattcttcgcttcattatctgttgatgaa
gctgttcttgctctaggagaagatgccagagctagaatggctaccgaagctcttttcttg
attgcaaacaaatacggtgactatatcagctcgggctggaaaagcatcgtggaatgtgtc
ttgagcctccacaaactccagatcttaccagctcatatagctagtgatgcagcggatgac
ccggagccatcaactagtaacatagagcaagaaagacctttagcaaatcccgtgtcagta
gtatcacaggcacaaccctcagcggcgcctagaaaatcctctagctttattggtcggttt
agccagcttttgtcttttgacatggaagagatagagccattgccaactgaggaagaactg
gcagcttataaactcgctcgtgggatagtgaaagattgtcacattgatagcatattctct
gacagcaagtttctccaagctgagtctctgcagcagcttgttagctctctcataaaagca
gccgcgaaagatgaagctagtgcggtcttttgccttgagcttctgattgcagtaactctg
aacaaccgagacagaatcctactgatctggcaaactgtttacgagcacatctcgggtatt
gttcagtcaacgacaacaccttgcccgcttgttgaaaaggctgttttcggtgtcttgaag
atttgtcagagattattgccttacaaggagaacctaacagacgaacttctgaagtcactc
caacttgttctcaagcttgatgcaagagtggctgatgcgtactgcgaacccattactcaa
gaagttgcccgtcttgtaaaagcgaatgcatctcatgtcagatctcatgttggttggcga
acaatcatatctctgttatcaatcacagctcggcatccagaagcttctgatgctggattt
gaagctctccggtttataatgtcagaaggagctcacttgctaccatcaaactacattctc
tgtttagatgcagctagacagtttgctgaatcccgagtcggcgaaatcgataggtctata
tcagccatcgacttaatgtcaaactctgtgttctgtcttgcaaggtggtctcaagaggcg
aaaaagtcggtgggagaagatgaagctatgatgaaactaagccaagatattggagaaatg
tggctcaggcttgtgaacaacctcaaaagagtttgtcttgatcagcgcgaccaagtgaga
aaccacgccatcttaatgctgcagagatctgtagccggtgcagacgggataatgttaccg
caacctctatggttccagtgcttcgactccgcaatcttcccattgctagacgaattgctc
gcggtttcagtcgaaaattcaagaaagacattcaagaaaacggttgaagaaacgcttgtg
ctcgccacaaagctcatgtcaaaggcttttcttcagtctctccaagacatctcgcagcaa
ccatcgttctgcagactctggcttggtgtattggaccgtatggggacttacatgtcgacc
aagttcagaggaaaacgcagcgagaaagtccatgaactcataccggaactgctgaagaac
acgttgctggtgatgaagacaacgggtgttctattaccaggtgatgatatcggtagtgat
agtttctggcaacttacttggcttcatgttaagaagatatctccgtctctgcaatctgaa
gtgttccctcaagaagagctcgatcagtttcagagacgaaacgcaaagcctgaagatact
ccacctgagatgggggtggaatag
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