Brassica oleracea (wild cabbage): 106300056
Help
Entry
106300056 CDS
T04124
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106300056
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
106300056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
106300056
NCBI-ProteinID:
XP_013591568
LinkDB
All DBs
Position
C6:8550746..8559900
Genome browser
AA seq
1888 aa
AA seq
DB search
MWTNVFRIGGLHHVSWFQFLPSEAELNPTSDTRDFSSRAEQNDVATYLVLSSHLRLQKEG
FLTTWTNSFVGPWDPSQGLYNPDEKIKLWLFLPGRHSSITDKAQAAVSKLRVVASGIWVA
PGDSEEISVAFSQSLRNCIERALSGLSYMRFGDVFSKVSPQNEEYLRRGRLTVEFIFAAT
EEAVFVHVIVSAKNVRTLSSGDAERLSRSSLKNSSYRLPVIVSPHGMRGSLTGFCLNDLV
KQVYFSSGNLRSSSGYIGLPPHVDIASRLINGDHCYVEVTLGCCQNINDNTSQTNSTFAV
NVPQTSVGSKDHRKGHPDILSKCEKRFIYPAEAVLVPILQSAFAKFSLKRFWLQNWIGPS
LAGSSLFMHWAGDFDFFGASGNKSDGFYEKNGYNSSGSSGNSSISSTSSASSGSGWRMTS
RTGDLDADADSLTCKDDHPKLGSKRPRTGMAESFGQVGTANDQFGWDWDDDDDDDRGVGM
DIQALLSEFGDFGDFFENDALPFGEPPGTAESHSLILPSDSADVGSSPMDMMDVSDQIVL
PVGFSSFESFNPAPPIIDEGLIKSQEVINNSVTSASAPSNQMSSSSNSEFDHLMKAEAMM
TFAPEYGAVEAPMSELSSTSFKSPYLPKSHKVESSNSRTSNYVYGPTPPATDSNGAADKI
LLGSKAYIGNNDGRTLYTKVEGRKDQYDKLPTLISDNNSKKKGVFQLKYSNYNAASAVKT
VQGKKTDGISAVVSTLLSSKTLLATDVGSVMFQAFMYRMRHKAISSKHSSPVSLSGLSGN
FFLNQVPNGPSSLTDNVSARNEIYKKEVPTRIAGDFDGGMLDSHMSAPVGVWRTVSVPKT
AKPASSPNIEAGSSLPHSSFSENSLLSYGQKQPLQELLDGIALLVQQATSFVDLALDSDC
GDGPYGWLALEELWRRELSCGPSAGHAGCGGTLASCHSLDIAGVKLVDPLSAEVFPSSVI
TLLQSDIKTALKSAFGQSDGPLYVTDWCKGRNQSMDGVSISEGSTAESVLSEVSNAIDGG
KGEESAQSQDIYSSELLRPTLFVLPSPSILVGYQDDWLKVSTNSLPHWEKAPFEPYALPK
NMNYTVVCPDIDPLTSAAVDFFQQLGTVYETCRLGTHLPTILGNQMETDAGRLSSSGFVL
LDCPQSMKIESNNTSLLGSLSDYFLSLSNGWNVNSYLKSLSKALKGLKLGSGLYTNQKEG
SASPCMVVYIVCPFPDPSAVLRTVVESSIALGSGIQPDRDRRSLLNSQVARAFGSSAAVD
EASISHIPVLSGFSVPKLVLQVVSVDSIFRITSPSFNELVILKDTAFSVYNKARRISRGM
PNDAFLSSSSLSSRSSSALASVNSISGIWKDCVSSRMTGSTHPRDGDIDGSIRTSSWDSS
WQITRSGGLSCDSNRNGDFYINDAIFYLFEPLFILSEPGSVDRGVSPTFGGLGSESSKPI
PEDGGRGSGLGVNSMEGTSSHGDASQVEGKAVPSLHCCYGWTEDWRWLVSIWTDARGELL
DTHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQACSSPENGSFKPRDFVITRIGSFFE
LEYLEWQKAIYTAGGPEIKKWPIQLRRSAPSGVATNSNGPSLQQHDLSLIQERASSTSTL
YGAHSKPSTFVKGGMGHSGGRKQTMGGQTISGTPRGLFQWVHSISFASISLDHSLHFVLP
AELVSPGGGQSSTGMSSANYIEGFTPVKSLGSTAFAYMMIPSPNMRFLHPSPLQLPTCLT
AESPPLAHLLHSKGCAIPLSTGFVVSKAVPSMRKDSRINVKEEWPSVLSVSLIDYYGGYD
NAHDKVLQGIMKQGGGRTKETRDFEVESHLILESIAAELHALSWMTVSPAYLDRRTALPS
HCDVVLRLSRLLHFADKERSRLPDKSGV
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccaatgtcttcagaattgggggtcttcatcacgtttcttggtttcagtttctt
cctagtgaagctgagctcaatcccacctctgatacaagagatttcagttcaagagctgag
cagaatgatgttgctacatatcttgtactttcatctcatctgcgcttgcagaaggaaggc
tttcttaccacatggaccaattctttcgttggaccttgggatccatctcaaggcttatac
aaccctgacgaaaagatcaagctttggctttttcttcctggacgtcattcatcaatcact
gataaagctcaggctgctgtctcaaagcttagagttgttgcgtcaggaatctgggtagca
cctggggactctgaggagatatcagttgccttttcacagtctttgcgtaattgcattgaa
agagcgttaagtggactttcctacatgagattcggagacgtgttttcaaaagtcagccct
caaaatgaagaatatttgaggaggggtcgtcttactgttgaattcatatttgctgctacc
gaagaggcagtttttgtccatgtcattgtttctgccaagaatgtccggacactttcaagt
ggcgatgctgagaggctgtcaaggagttctttaaaaaactccagttataggcttccagtg
attgtttctcctcatggaatgcggggtagcctcactggattctgtctcaatgaccttgtc
aagcaagtctacttcagttctggaaacttaaggtcttcaagtggatatattggtctccct
cctcatgttgatattgcgtcccgtctgataaatggcgatcactgttacgtggaagttaca
cttggttgctgccaaaatataaatgacaacacaagtcaaactaattcaacctttgcggtc
aatgttccccaaacatcagttgggagtaaagatcaccggaaaggacacccagatatatta
tcgaagtgtgaaaaaaggttcatatatccagctgaggcagtgcttgtgccaatcttacag
tcggcatttgctaaattttctttgaaaagattttggcttcaaaactggataggaccatca
ctggcaggctcgtcgttatttatgcactgggctggtgattttgacttctttggagcgtct
ggaaataagagtgatgggttctatgaaaaaaatggctataatagcagtggcagtagcggt
aatagcagcattagttcaacaagtagtgcttctagcgggagtggttggagaatgacttca
agaactggtgaccttgatgcggatgcagattctttgacttgtaaagatgatcacccaaaa
ttgggttccaagcggccgcgaacagggatggcagagtcattcggtcaagtaggcactgca
aatgatcaatttggttgggattgggatgatgacgatgatgatgatagaggagttggcatg
gatatccaagcacttctttcagagtttggggactttggtgacttctttgagaatgatgcg
ttaccttttggggagccgccgggaacagcagagtcgcattccctcatacttccttcagat
tctgctgatgtaggttcgagtccaatggatatgatggatgtatcagaccagattgtgttg
cccgttggattttcgtcttttgagagctttaatcctgctccccctatcattgatgaaggc
cttatcaaaagtcaagaagtcatcaacaacagtgtcacttcagcttcagctccttcaaat
caaatgtcaagctcttctaacagtgagttcgatcatttgatgaaagcagaagctatgatg
acatttgctcctgagtatggagctgttgaagcacctatgagcgagctttcgtcgacgtct
ttcaaaagcccatatcttcccaagtctcataaagtggagagttcaaattcaagaacgagt
aactatgtttatggacccacaccacctgccactgattctaatggagcagccgataagatt
ttgcttggatcaaaagcatacattggtaacaatgatggcagaactttgtacactaaggta
gagggcagaaaggaccaatatgataagctacctactttaatcagtgacaacaatagtaaa
aagaagggtgtgtttcagttaaaatattcaaactacaatgctgctagtgctgttaagact
gtacaggggaaaaagactgacggtatatctgctgttgttagtactttgttatcttcaaag
accttgctggcaacagacgtgggaagcgttatgttccaagccttcatgtataggatgcgg
cacaaagccatttcttcgaagcacagttcacctgttagtctgagtgggctgagtggaaac
ttcttcttgaaccaggtgccaaatgggcctagtagtctgacagacaacgtatctgcaagg
aacgagatatataagaaagaagtacctactagaatagctggagatttcgatggaggaatg
ttagacagccacatgagtgcaccagttggcgtgtggcggactgtttcagtcccaaaaaca
gctaaacctgctagttcgccaaacattgaggcaggctcatccttgccccacagttcgttt
agcgaaaacagcttgctttcttatggccaaaagcagccgttgcaggagcttctagatgga
atagcactacttgtacagcaagctacttctttcgttgatttagctctggattcagattgt
ggggatggaccttatggctggcttgcactggaagaattgtggagacgggaactgtcgtgt
ggaccctctgctggccatgcaggctgtgggggaactttggcttcctgccattctctggac
attgctggtgtcaagctagttgacccactctctgctgaggtttttccttcctctgtcatt
acactactgcaatctgacatcaagacagctctgaaatccgcatttggtcagtcagacggg
ccattatatgtcacagattggtgcaagggccgaaatcaatcaatggatggagtatctatt
tccgagggatctactgctgagtcagtcctgagtgaagtgtcaaatgcgatagatggtggg
aaaggagaggagtctgctcagagccaagatatatacagttcagagttactccgacctaca
ctttttgttcttccatcaccctctatacttgtcgggtaccaagatgactggcttaaggtt
tcaaccaactccttgccacattgggaaaaggcccctttcgagccatatgctctgccgaaa
aatatgaactatactgttgtatgtccagatatagatcctttaaccagtgctgctgttgat
ttcttccaacaacttggaactgtttatgaaacgtgcagactgggaacccatttgccaacg
atcctgggaaatcaaatggaaactgacgctggaagattatcctcatcaggatttgttctg
cttgattgccctcagtcgatgaagattgaaagcaataacacgtcgcttctgggatctctc
agtgattattttctgtccttgtcgaatgggtggaatgtaaatagctacctgaagtcttta
tcaaaagcgctgaaaggtcttaagcttgggtctgggctttacacaaaccagaaagaaggg
tcagctagtccatgcatggtagtgtacatagtgtgtccatttccagacccttcggcagtt
ttaaggacagtcgttgaatcgtctatagcacttggatcagggatacagccagacagagac
cggagatctttacttaatagtcaggttgcaagggcctttggtagttctgctgctgtagac
gaagcatcaatatctcacattccagtgctttcggggtttagcgtccctaaactagttcta
caagttgtgtctgttgattctattttccggataacaagtccaagctttaatgagcttgtc
atcctcaaggatactgccttttctgtctacaataaagctcggagaatttcaagaggaatg
cctaatgatgcatttctctcatcatcatcattatctagcagatcctcttcagccttggca
tcagtgaattctatctcaggaatctggaaagactgcgtcagttctcgaatgacaggttct
acacatccaagagatggtgatattgatggtagcattagaacgagtagttgggatagtagc
tggcaaataacaagatctggaggattaagctgcgactcaaacagaaacggagatttttac
attaatgatgcaattttctatctatttgaaccgcttttcatcctttccgagcctggttct
gtggatcgtggagtttcacctactttcggcggcttagggtctgagtcttcaaagccaata
cctgaggatggtggcagaggttcaggacttggcgtcaattcaatggaaggtacaagctcc
cacggggatgcatcacaggttgaagggaaggctgttccaagcttacattgctgctacggt
tggacagaggactggagatggcttgtaagcatctggacggacgccaggggtgaattgctt
gacacacatatattcccctttggtgggattagcagtagacaggatacgaaagggctgcag
tgtctttttgttcaagttctgcagcagggatgtcagatactacaggcatgttcctcccct
gaaaatggatctttcaaacccagggattttgtcattacgcgcattgggagtttctttgag
cttgagtaccttgagtggcaaaaggcaatttacacagctggaggtcctgagattaagaag
tggcctattcaacttcgacgttctgcaccttctggcgtagccaccaatagcaacggacct
tccttgcaacagcatgatctgagtttgattcaagagagagcctcgtcaactagcacactc
tacggtgctcactcaaaaccatccacctttgtgaaaggcggtatggggcactctggtgga
agaaagcaaacaatgggtggacaaaccatttctggtactccaagggggttgtttcagtgg
gttcacagcatcagttttgcttctatttcacttgatcattctctgcattttgttcttccg
gctgagttggtatctcctggaggtggacagagcagtactggtatgagttcagcaaattac
attgaaggtttcactccagtcaagtctcttgggtcaacggcttttgcttacatgatgata
ccatcacccaacatgcgctttcttcacccaagtcctcttcagcttcctacatgtttaact
gcggaatcacctccacttgctcacctccttcacagcaaaggctgtgcaatccccttgtct
accggatttgttgtttcaaaagctgtgccttccatgagaaaagactcgagaataaacgtg
aaagaagaatggccatcagttctctctgtaagtctcatagactattatggtggttatgac
aacgctcatgacaaagttcttcaaggaatcatgaagcaaggcggtggacggaccaaagaa
actagagattttgaggttgaaagccatctaatccttgagtcaattgcagcagaactccat
gctctatcgtggatgactgttagtccagcatatctggataggcggactgcattgccgtct
cactgtgatgtggttctcagactgagtcgtctacttcattttgcggataaagaacgctcc
aggctaccagataagtcaggagtttga
DBGET
integrated database retrieval system
