Brassica oleracea (wild cabbage): 106300192
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Entry
106300192 CDS
T04124
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106300192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106300192
03110 Chaperones and folding catalysts [BR:
boe03110
]
106300192
03029 Mitochondrial biogenesis [BR:
boe03029
]
106300192
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106300192
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106300192
Messenger RNA biogenesis [BR:
boe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106300192
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP60 / Chaperonin
106300192
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106300192
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106300192
Exosomal proteins of other body fluids (saliva and urine)
106300192
Exosomal proteins of breast cancer cells
106300192
Exosomal proteins of colorectal cancer cells
106300192
Exosomal proteins of bladder cancer cells
106300192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
106300192
NCBI-ProteinID:
XP_013591741
UniProt:
A0A0D3CSF1
LinkDB
All DBs
Position
C6:complement(14288084..14291595)
Genome browser
AA seq
600 aa
AA seq
DB search
MASTFTATSSIGSMVAPNGHKSDKKLMNKLFSSSFGRRQNVCPRLRRSSPAIVCAAKELH
FNKDGTTIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP
VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK
ALVAELKKMSKEVEDSELADVAAVSAGNNEEIGSMIAEAMSRVGRKGVVTLEEGKSAENA
LYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYP
ILIIAEDIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTGATVIREEVG
LSLDKAGKEVLGHAAKVVLTKETSTIVGDGSTQDAVQKRVTQIKNLIEQAEQDYEKEKLN
ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKV
DAIKAALENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNENVKYGYNAATG
KYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaactttcactgcaacgtcttccattggttcaatggttgctccaaatggtcac
aaatctgataagaaacttatgaacaagttgttttcaagctcgttcggaaggaggcagaac
gtgtgccccaggctcagaagatccagtcctgcaattgtatgcgcagccaaggagttgcat
tttaacaaagacggcactaccattaggaaacttcaagctggtgtcaacaagcttgcagac
cttgttggtgtgacacttggacctaaagggagaaacgttgttcttgagagcaagtatgga
tctccaagaattgttaatgatggtgtgaccgttgcaagggaggttgagttggaagatcca
gttgagaacattggtgctaagctagtcaggcaagcagctgccaagaccaatgacctggcc
ggtgatggtaccacaacatctgtggttcttgctcaaggttttattgctgagggtgtcaag
gtggtggctgctggtgccaaccctgttttgatcactagaggcattgagaagacagcaaag
gctttggttgccgagctcaagaaaatgtccaaggaggtggaagacagtgaacttgcagat
gtggcagctgttagtgcgggtaacaacgaagagattggaagtatgattgctgaagcaatg
agcagagttggcaggaagggtgtggtgacacttgaggagggtaaaagtgctgagaacgca
ctctacgtggtggaaggaatgcaatttgaccgcggttacatctccccttactttgtgaca
gacagtgagaaaatgtcagttgagttcgacaactgtaagctgcttcttgttgacaagaaa
atcaccaatgcaagggatctcgttggtgttttggaggatgccattagaggaggataccca
attctaattattgcagaagacattgagcaggaggctttagcgacccttgtggttaacaag
cttagaggtacactgaagattgcagctctcagagctccaggatttggagagcgcaagagc
caataccttgacgatattgccattctcactggagcaactgtgattcgtgaggaagttggt
ctttcactggacaaagctggaaaagaggttcttggacatgccgcaaaggtcgtcctcact
aaagagacttcgaccattgtgggtgatgggagcacacaggacgcagtgcaaaagcgtgtt
acacaaattaagaaccttattgagcaagcagagcaagattatgagaaggaaaaactgaat
gagagaattgcaaagctctccggtggagttgctgtgattcaggtcggagcacaaactgag
acagaactcaaagagaagaaactgagagttgaagatgctcttaatgctacaaaggctgct
gttgaggaaggtattgtagttggtggtggttgtactctgcttcggcttgcttccaaggtt
gatgccattaaagccgcacttgaaaatgatgaagaaaaggttggtgcggatatagtgaaa
agagcactgagttaccctctgaaactgattgccaagaatgctggagtcaatggaagcgta
gttagcgagaaggtgctttctaacgagaacgtgaaatacggttacaatgctgcaaccggc
aagtacgaggatttaatggctgcaggaatcattgatccaacaaaggttgtgaggtgttgt
ttggaacacgcagcttcggttgcaaagacattcttgatgtcagactgtgttgttgttgag
atcaaggaacctgagccagttcccgtaggcaacccaatggacaactcaggatatggatac
tga
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