Brassica oleracea (wild cabbage): 106300439
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Entry
106300439 CDS
T04124
Name
(RefSeq) chaperone protein ClpB1-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
boe03110
]
106300439
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP100
106300439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_18
bpMoxR
nSTAND3
AAA_14
AAA_7
ATPase_2
IstB_IS21
RuvB_N
AAA_28
TniB
NACHT
DUF815
RNA_helicase
TsaE
Zeta_toxin
Mg_chelatase
ResIII
AAA_25
AAA_19
T2SSE
DUF87
ABC_tran
NBD_SMAX1
DNA_pol3_delta2
DUF2987
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
106300439
NCBI-ProteinID:
XP_013592033
UniProt:
A0A0D3CWP6
LinkDB
All DBs
Position
C6:27426578..27430089
Genome browser
AA seq
913 aa
AA seq
DB search
MNPEKFTHKTSETIAAAHELAVNAGHAQITPLHLAGALISDPAGIFPQAISTAGGGEAAA
QSAERVINQALKKLPSQSPPPDDIPASSSLIKVIRRAQSAQKSRGDTHLAVDQIIIGLLE
DSQIKDLLSEVGVGAGKVKAEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEEAGKLD
PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPNSLVDVRLV
SLDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGKSEGSMDAANL
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYE
GHHGVRIQDRALINAAQLSARYITARHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERK
RMQLEIELHALEREKDKASKARLVEVRKELDDLRDKLQPLTMKYKKEKERIDEIRRLKQK
REELMFALQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSDENMMLTENVGPEHIAEV
VSRWTGIPVTRLGQNEKDRLIGLADRLHKRVVGQDQAVSAVAEAILRSRAGLGRPQQPTG
SFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEG
GQLTEAVRRRPYCVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNSVIIMTSN
LGAEHLLSGLTGKVTMQVARECVMQEVRKHFRPELLNRLDEIVVFDPLSHDQLRKVARLQ
MKDVAVRLAERGVALAVTDAALDYILAESYDPVYGARPIRRWMEKKVVTELSKMVVREEI
DENSTVYIDAGSGGSDLVYRVEKNGGLVNATTGQKSDVLIHIANGPKKSDAAQAVKKMRI
EEIEDDDEEMVED
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagagaaattcacacacaagacgagcgaaacaatcgccgccgctcacgagcta
gccgtaaacgcaggccacgctcaaatcactcctcttcatctagccggtgccttaatctcc
gaccccgccggaatattccctcaagcgatctccaccgccggcggcggggaagccgccgct
caatccgccgaaagagtgatcaaccaagctttaaagaagctcccctctcagtccccaccg
ccggatgatatccccgcgagctctagccttattaaggtcatacgcagagctcaatccgct
cagaagtcgcgcggggatactcacttggctgttgatcagatcatcatcggccttctcgaa
gattctcagataaaggatctgttgagcgaggtaggcgttggggcggggaaggtgaaggct
gaggttgagaagcttcgtggaaaggaagggaagaaggtggagagtgcttctggcgatacg
aattttcaagctttgaagacttatgggagagacttggttgaggaggcggggaagcttgat
cctgtgattgggagagacgaggagattaggagggttgtgaggattctttcgaggaggacg
aagaacaatcctgtgcttattggagagccaggggttgggaagacagctgttgttgaaggc
ttggcgcagaggattgtgaagggagatgttcctaatagtcttgttgatgtgaggttagtg
tctttggatatgggtgcgttggttgctggtgctaagtacagaggggagtttgaggagagg
ttgaaagctgtgctgaaagaagttgaggaagctgaagggaaagtgattctgtttatcgat
gagattcatttggttcttggcgctgggaagagtgaagggtcgatggatgcggcgaatctg
tttaagcctatgttagctagaggtcagcttcggtgtattggtgctacgacgcttgaggag
tataggaagtatgttgagaaagatgctgcctttgagaggcggtttcaacaggtttatgta
gctgagccgagtgtgcctgacactattagtattctgagagggcttaaagagagatatgag
ggacatcatggtgttcgtatccaggaccgagctttgatcaatgctgctcagctttctgct
cgttacatcactgctcggcatttacctgataaagctattgatttggtggatgaggcttgt
gccaatgtgagagttcaacttgatagtcagcctgaagagattgataaccttgaaaggaag
aggatgcagctggaaattgaacttcatgccttggaaagggaaaaagacaaagccagcaag
gctcggcttgtggaggtgcggaaagagcttgatgacctgagggacaagctacagcctctc
acgatgaagtacaaaaaggagaaagagagaattgatgagattcgcaggcttaaacagaaa
agagaagagctcatgtttgctttgcaagaagcagaacgaagatatgaccttgcaagagct
gctgacctaagatacggagcaatccaagaagtggaatctgcaatagcccaactcgaagga
acttctgacgagaacatgatgctcaccgaaaacgttgggccggaacacattgctgaagtt
gtgagccgttggacagggattccagtgacaagacttggtcagaacgagaaggacaggttg
attggtcttgctgataggttgcacaagagggttgtgggacaagatcaagctgtgagcgca
gttgctgaggcgatcttaaggtcaagggcaggactcggaaggccacaacagccaactgga
tcattcttgttccttggcccaactggtgttggcaaaactgagcttgctaaggctcttgct
gagcagctctttgatgatgaaaacctcttagttcggattgatatgtcggagtatatggaa
cagcactctgtctctcgcctcattggggcaccacctggctatgttggtcacgaggaagga
ggacaattaactgaggctgtgaggagacgaccttattgtgttatactctttgatgaagtg
gagaaagcccatgttgctgttttcaacacgttgctacaagtgttggacgatggtagattg
actgacggccaaggaaggactgtagatttcaggaactcggtgataatcatgacatcaaac
cttggagcagagcatcttctctcagggctaactgggaaagtgacgatgcaagtggcccgg
gaatgcgtgatgcaggaggtgaggaagcatttcagaccagagctcctgaacaggcttgac
gagatcgtggtgttcgatcccctttcacatgaccagttgaggaaagtagcccgcctccag
atgaaggacgttgctgtccggcttgctgagagaggcgttgctttagcagtcaccgatgct
gctttagactacattttagctgagagttatgacccggtgtatggtgctaggccaataagg
agatggatggagaagaaggtggtgacagagttgtcgaagatggttgtgcgtgaggaaatt
gatgagaactccacagtttacatagatgcaggcagtggtggatctgatcttgtgtaccgt
gttgagaagaatggtgggctagtgaacgctacgacagggcagaagtcagatgttctgatt
catattgctaatgggccaaagaaaagcgatgcagctcaggcggtgaagaagatgaggatt
gaggaaatagaagatgatgatgaggaaatggttgaggattaa
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