Brassica oleracea (wild cabbage): 106300493
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Entry
106300493 CDS
T04124
Name
(RefSeq) exportin-T isoform X1
KO
K14288
exportin-T
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106300493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106300493
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
106300493
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-T
Xpo1
Motif
Other DBs
NCBI-GeneID:
106300493
NCBI-ProteinID:
XP_013592098
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Position
C6:complement(36210202..36215222)
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AA seq
991 aa
AA seq
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MDDLENAILICFESGPVEASLKPQAAAYCQQAKEAPDICRICIQKLWFCGLVQVQFWCLQ
TLQDVLRVSYGSMTLEERSFVRSSVFSMACLEGVDNNENVVRVVEGPVFVKNKLAQVLVT
LIYFEYPLVWSSVFVDFMGHLSKGGVVIDMFCRVLNGLDDELISLDYPRSPEEIAVAARV
KDAMRQQCVPQIARAWYDIVSLYRNSDPELSATVLDCMRRFVSWIDINLVANDAFVPLLF
ELILSEGLADQVRGAAAGCVLAMVAKRMEPHSKLPLLKTLQISRVFGLVSEDADSELVAK
VSALVTGYAVEVLECHKRLNSEETKAVSMDLLNEVLPSVFYVMRNCEVDSTFSIVQFLMG
YVSTLKGLPALKEKQLLHITQILEVIRIQICYDPMYRNNLDALDKIGLEEEDRMSEFRKD
LFVLLRTVGRVAPEVTQHFIRNALANAVESSSERNVEEVEAALSLLYSLGESMTEEAMKS
GSGCLSVLIPMLLTTKFPGHSHRLVALVYLENITRYMKFIQENSQYIPNVLGAFLDERGL
HHQNVHVSRRAYYLFMRVVKLLKSKLVPFIDRILQNLQDTLSQLTTMNFASRQLSGTEDG
SHIFEAIGLIIGLEDVPAEKQSDYLSLLLTPLCQQIEKGLMEAKVARGEDFPVKIANIQF
AIVAINALSKGFSERLVTVSRPRIGLMFKQTLDVLLRILVEFPKVEPLRSKVISLIHRMV
ETLGPSVLPYLPKALEQLLADSEQPKEMVGFLVLLNQLICKFSGSLRGILEEVYPVVAYR
IFRVIPIDGLTPRTGAVTDEEMRELIELQRTLFTFLHVMATHDLSSVFLAPKSMTYIKPM
TLLLLNTSCTHKDITVRKACVQIFIRLIEDWCPKSYTVEKVPGFQDFMIKNFATNCCLFS
VLNTSFDFNDANTQGLLNEIITVQKVMYERFGNAFLMHLMSGAFPSANCPQDMAEQYCQK
LQGNDIGGLKSYYQSLIKNLRLQQNGNHVFR
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctcgaaaacgcgatactaatctgcttcgaatctggtcccgtcgaagcctcg
ttaaagccccaagccgctgcttactgccagcaagccaaagaggcgccggacatatgcagg
atttgcattcagaagctctggttctgcggcctcgtccaggtccagttctggtgcttgcag
actcttcaggacgtgttgagggttagctacgggtccatgacgttggaggagaggagcttt
gttaggagctcggtgttctcgatggcgtgtttggaaggtgttgataataatgagaacgtt
gtgagggttgtggaagggcctgtgtttgttaagaacaagctcgctcaggttttggttact
ttgatctactttgagtatcctttggtttggtcctctgtgtttgttgatttcatggggcat
ttgagtaaagggggtgttgtgattgatatgttttgtcgggttttgaatgggttggatgat
gagttgattagcttggattaccctcggtcgccggaggagatagcggtcgctgcgagggtg
aaggatgcgatgaggcagcagtgtgtgcctcagattgctagagcttggtatgacattgtc
tccctgtacaggaactctgatcctgagctctctgctactgtgttggattgtatgaggaga
tttgtatcttggattgatattaatttggttgctaatgatgcgtttgttccgcttctgttt
gagttgattttgtctgaggggttggctgatcaagtccgcggtgcagcagctgggtgtgtc
ttggctatggttgctaagcggatggagccgcactcgaagctgcctctgttgaagactctt
cagataagtcgtgtttttggtttagtgtctgaggatgctgactcagagcttgtggcgaag
gtatccgctttggtgactggctatgctgttgaggttcttgaatgccataagcggttgaac
tcagaggagaccaaggcggtctccatggatctgctgaacgaagttcttccatcggttttc
tacgtcatgcggaactgtgaggtggattctactttcagcatcgtccagtttctcatgggc
tacgtctcaactctcaaaggcctccctgcactgaaggagaaacagctcctccacattact
cagattctcgaagtgatcagaatccagatctgctacgatcctatgtaccgcaataacctc
gatgctctggacaagattgggttggaagaggaggatagaatgtccgagttcagaaaagat
ctctttgtcttgctacgtacagtgggacgcgttgctcctgaagttacacagcatttcatc
cgaaacgctttggcaaatgcggttgaatcctcttctgagagaaacgtcgaagaagtagaa
gctgcgctctcgcttttgtattcgctgggagagtcaatgacggaggaggccatgaaatca
gggtctggatgtttgagtgtattgattccgatgctcttgaccacaaagttccctggtcat
tctcatagactagttgcgcttgtctacttggaaaacataactaggtacatgaagtttatc
caagaaaattcacagtacattcccaacgttcttggtgctttccttgacgaaaggggtttg
catcaccagaacgtccacgtgagccgtagagcttactacttgttcatgagagtggtgaaa
ttgttgaaatcaaagcttgttccgttcattgataggatcctgcagaaccttcaagataca
ttgtcccagttgacgaccatgaactttgcatcaagacaactttcaggaactgaagatggc
agtcacatttttgaggccattggcttaatcatagggttagaggatgtcccagctgaaaag
cagtcagattatctttctttactgcttactcctctctgtcaacagattgagaaaggactc
atggaggcaaaagttgcaaggggcgaggactttcctgtaaaaattgctaatatccagttt
gccattgtggcaattaatgctctcagcaagggctttagtgaacgtcttgttactgtgagc
cgtcctcgaattggtctcatgtttaagcagacgcttgatgtgcttctaaggattttggtt
gagtttccaaaggttgagcctttgcggagtaaggtcatatcactcatacaccgtatggtt
gaaacccttggaccctctgtgttgccttatcttcccaaggctttagaacagcttcttgct
gacagtgagcagccaaaggaaatggttggtttcctggtactactcaatcagctcatctgc
aagttcagcggctctctccgtggtatactggaagaagtctatcctgtggttgcctatagg
attttcagagtaattccaatagatggattaaccccacgcactggagctgtcactgatgag
gaaatgagggaactgatcgagcttcagaggacgctcttcacatttcttcatgtgatggcc
acacatgatctctcttctgtattccttgcccctaaaagtatgacgtatataaaaccgatg
actctgctgcttttgaacacttcttgtactcacaaggatattactgtacgaaaggcatgc
gtgcagatatttattagacttattgaagattggtgtcccaagtcatacaccgtggagaag
gtcccaggttttcaggatttcatgatcaaaaattttgcaacaaactgctgcttgttcagt
gtactcaatacatcatttgatttcaatgacgcgaatactcagggcttgttaaatgaaatc
atcacggttcagaaagtgatgtatgaaagatttggtaatgcgtttctcatgcatcttatg
tctggagcttttccatctgcaaattgtccacaagatatggcggaacagtattgccaaaag
ttgcagggtaatgatattggggggctcaagtcatactaccagtcccttataaaaaatctc
aggcttcaacaaaacgggaatcatgttttcagatag
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