KEGG   Brassica oleracea (wild cabbage): 106300586
Entry
106300586         CDS       T04124                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106300586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106300586
   03041 Spliceosome [BR:boe03041]
    106300586
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     106300586
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     106300586
Spliceosome [BR:boe03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    106300586
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 106300586
NCBI-ProteinID: XP_013592216
UniProt: A0A0D3CQN3
LinkDB
Position
C6:complement(7545608..7548231)
AA seq 402 aa
MDMLKKRRLDENGNGILNDAHITRLTPHDARKLIERFSTDQLLDILQNAVARHPDVLDLV
RSTADADITQRKLFIRGLAAETTTEGLRSLFSSYGDLEEAIVILDKVTAKSKGYGFVTFR
HVDGAILALKDPSKKMDGRVTVTQLAAAGNQGAAAAAAHVSDVSMRKIYVANVPVDMPAD
RLLNLFLAYGEIEEGPLGFDKVTGKSRGFALFVYKTSEGAQAALADPTKVIDGKHLQCKL
AIDGKKGKPPGGGPGKDVAAGAGNGHGHGNGMGVAPPPGPYGPAVGGPGGMGGYNGYSGG
PPPHHMNSTPSSMGGGPGAYGGAYGGHYGGYGGPGSGGYGLGTSGPYRMPPSSMGGGGGY
PESGHYGHSSGSAYPGQHQPVGSSTAPRVPPGGMYPNGPPHY
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggacatgttgaagaagagaaggctcgacgagaacggcaacggcatcctcaacgacgcg
cacattacccgattgacgccgcacgacgcgaggaagctcatcgagcgattctccaccgat
cagctcctcgacatcttacaaaacgccgtcgctcggcaccccgacgtcctcgatctcgtc
agatcgaccgccgacgcagacatcacgcagaggaagctcttcatccgcggcctcgcggcg
gagaccacgacggaaggtctccgatcgcttttctccagctacggagatctcgaggaggcg
atcgtgatcctcgacaaggtgacggccaagtcgaaggggtacgggttcgtgacgttcagg
cacgtggacggagcgattctcgcgttgaaggatccgtctaagaagatggacgggcgcgtg
acggtcacgcagctcgcggcggctgggaatcaaggtgcggccgctgcggcggctcatgtt
tcggatgtgtcgatgaggaagatttatgtggcgaatgtgccggttgatatgcctgcggat
aggttgttgaatctgtttttggcttatggggagattgaggaaggtcctttggggtttgat
aaggttactgggaagtctagggggtttgctttgtttgtgtataagacatccgaaggtgct
caggcggcacttgctgatcctactaaggtgattgatgggaagcatttgcagtgtaagttg
gctatagatggtaagaagggaaagccaccaggtggtggtccgggtaaagatgttgctgct
ggggctgggaatggtcacggtcatggtaatggaatgggtgtggctcctcctcctggacct
tatgggccagctgttggtggacctggtgggatgggtggttacaatgggtactcaggagga
ccaccaccgcatcatatgaactccacaccatcatctatgggcggtggaccaggtgcatat
ggaggtgcgtatggaggtcattatggtggatacggtggtccaggatctgggggttatggt
cttggtacgagtggtccgtatagaatgccaccaagttcgatgggtggtggtggtggttat
cctgagagtgggcactatgggcattcatcaggttcagcatatcctgggcagcatcagcct
gttggttcctccacagctccgagagttcctcctggaggaatgtaccccaacggtccacca
cattactga

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