Brassica oleracea (wild cabbage): 106300630
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Entry
106300630 CDS
T04124
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106300630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106300630
Spliceosome [BR:
boe03041
]
Common components
Common spliceosomal components
SR proteins
106300630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_2
CLIP1_ZNF
zf-CCHC_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106300630
NCBI-ProteinID:
XP_013592269
LinkDB
All DBs
Position
C6:complement(18890633..18893120)
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AA seq
288 aa
AA seq
DB search
MPRFDDRYGNTRLYVGRLSSRTRSRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
RHYLDGRDFDGSRITVEASRGAPRGSRDSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG
DWKNKCYRCGERGHIERNCKNSPSPKKARGGGSYSRSPVKSRSPRRRRSPSRSRSYSRGR
SYSRSRSPVRRERSVEDRSLSPKAMERSVSPRGKDQSMSPERRVVDASPKREKQEGSDYE
GSPKENGNGKSSVSPIVGGEESPAGLDRSPIDDEPELNRSSPKGSESP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctttgatgatcgatatggaaacactcgcctttacgttggtcgcttgtcatct
agaactcgttccagagaccttgagcgtcttttcagcagatacggaagagtacgagatgtt
gatatgaagcgcgattacgcctttgttgaatttagtgatcctcgtgatgctgatgatgct
agacactaccttgatggacgagacttcgatggaagtcgcatcactgtggaggcttccaga
ggggcacctcgtggttctcgggactctcgggataatggtagtagaggtccacctcctggt
tctgggcgctgttttaactgcggtgtcgatggtcattgggctcgggactgcacagctgga
gactggaagaacaaatgttaccgctgtggtgaaagaggacacattgagagaaactgcaag
aacagtcctagtcctaagaaggccaggggtggtggaagctactccaggtcaccagttaaa
tcacgctcccctcgccgcagaagaagccctagccgtagccgtagttacagccgtggtcgt
agctacagccgatcacggtcgccagtgagaagagagagaagcgtggaggatagatcactc
agtcctaaggcaatggagcgatctgtatctcccagaggcaaagaccaaagcatgagtcca
gagcgaagggtcgtagatgcaagcccaaaacgggaaaagcaagaaggatcagactatgaa
ggtagcccaaaagagaatggtaatgggaagagctctgtgagtcccattgtgggaggtgaa
gaaagtcctgctggactagacaggagtcccattgatgatgagcctgagcttaaccgttct
tcccctaaaggcagcgagtcaccttga
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