Brassica oleracea (wild cabbage): 106300636
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Entry
106300636 CDS
T04124
Name
(RefSeq) glycine--tRNA ligase 2, chloroplastic/mitochondrial isoform X1
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106300636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106300636
Enzymes [BR:
boe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
106300636
Transfer RNA biogenesis [BR:
boe03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106300636
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Arg_repressor
Motif
Other DBs
NCBI-GeneID:
106300636
NCBI-ProteinID:
XP_013592280
LinkDB
All DBs
Position
C6:complement(26979531..26987662)
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AA seq
1065 aa
AA seq
DB search
MAILSISFPLIISSFLRPHASPRFLHLPRYLPRSPYRRFHRTAVSSNVHHHPSHRKPDDN
DSNSVSIPTFQQAIQRLQEYWASVGCAVMQPSNTEVGAGTMNPSTFLRVLGPEPWNVAYV
EPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFINSLSALGIDVTQHDIRFVED
NWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPVSVEITYGLERILMLLQEVDH
FKKILYADGITYGELFLENEKEMSSYYLEHASVNRLQKHFDSFDEEARSLLALGLPIPAY
DQLLKTSHAFNILDARGFVGVTERARYFGRMRSLARQCAQLWLKTRESLGHPLGVASEHI
PPIHHGAALENVAEKVPEDPRSFIIEIGTEEMPPPDVINASEQLRVLVVQLLENQRLRHG
VVKAFGTPRRLVVLVDAMSPKQLEEEVEVRGPPASKAFDDQGNPTKAADGFSRRYGVPLE
KLYRKVDGKTEYVHARVTQPARLALEVLSEELPGILAKISFPKSMRWNSSHVMFSRPVRW
VMALHGDLVVPFCFAGNTSGNVSFGLRNTASATLLVDTAESYEDTMRNAGINIEIEERKK
IILDKSNALAKSVNGRVVVQQNLLNEVANLVEAPVPLIGKFKESFLELPDELLTIVMQKH
QKYFSITDESGKLLPYFIAVANGAINEDVVRKGNEAVLRARYEDAKFFYEVDTRKRFSEF
RDQLKGILFHEKLGTMLDKMNRLEKMVTKLCLALEVDEDLLPVVEEAASLALSDLATSVV
TEFTSLSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTDAGMVLAIGDRLDSLV
GLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKHALDIAASVQPIKVEANTLDD
VYQFVTRRLEQLLVDNGVSPEVVRSVLAERGNDPCLAARTAYKMEKLSKGEIFPKIVEAY
SRPTRIVRGKDVDVGVEVDESVFETSQEKELWSIYTSIKDRIHSGIGIEEFTEISTQLVE
PLEDFFNNVFVMVEEERVRKNRLALLNNIASLPSGIADLSFLPGF
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggccatcctctctatctcattccctctcatcatctcctccttcctccgtcctcacgcc
tctcctcgcttcctccacctccctcgctaccttcctcgatccccttaccgccgatttcac
cgcaccgccgtctcctccaatgttcatcatcacccttcccatcgcaagcccgatgataat
gacagcaactccgtctctattcctacattccaacaagcaattcaacgcctccaggagtat
tgggcttctgttggatgcgccgttatgcagcccagcaacaccgaggttggagctggcact
atgaatccttccacgtttttgagggttcttggccctgagccatggaatgttgcctatgtt
gagcctagcattcgtcctgacgatagtcgatatggagagaatcccaataggcttcaaagg
cacactcagtttcaggtcatcttgaaacctgatcctgggaactctcaagacctctttatc
aacagtctctctgctttaggaattgatgtgactcaacacgatatacggtttgtcgaagac
aattgggagagtccggtgcttggtgcttggggattgggctgggagatttggatggatggt
atggaaatcactcagtttacttacttccagcaggctggaagccttcagctgtctccagta
tctgttgaaataacttatggccttgagcgcatcctcatgttgcttcaggaagttgaccat
ttcaagaagattttatatgctgatggaatcacttacggggaacttttcttggaaaatgag
aaggaaatgagctcatattatcttgagcatgctagcgtgaaccgtcttcaaaagcatttc
gattcttttgacgaagaagcacgttccttgcttgccttaggccttccaatccctgcgtat
gaccagctactgaagacatctcacgcttttaacatcttagatgctagaggtttcgtcggt
gtaactgaacgtgctcgttattttggtcgaatgcgcagcttggctcgccaatgtgcccaa
ctgtggttaaagacacgtgaatctcttggacatcctcttggtgttgcctctgaacatatt
cctcccattcaccacggagcagctttggaaaatgtggctgaaaaggttcctgaggatcca
agatcatttatcattgagatagggactgaagagatgccacctccagatgttatcaatgct
agcgaacaactcagggttttagtcgtacaattgttagagaaccaaagactgcggcatggc
gttgtgaaagcatttggcacacctcgtaggctagtggttctagttgatgctatgtcccct
aagcagctggaagaggaggttgaagttcgaggaccccctgcgtctaaagcgtttgatgat
caaggaaatcctacaaaggctgcagatggttttagccgtagatatggcgttccgttggaa
aaattgtacagaaaagttgacgggaagacagaatatgttcacgcacgagttacacagcca
gctcgacttgcgttggaggtcctgtcagaagaattaccaggtatactggctaaaatatcg
ttcccaaagtcaatgcgctggaactcgtcacacgtaatgtttagcaggccagttcgctgg
gttatggccttacatggggatctggttgtaccattctgctttgctggcaacacaagtgga
aatgtttcttttggacttcgcaacactgcttcagcgacactgttggtagatactgcagag
tcctatgaagatactatgaggaatgctggaatcaatattgagattgaggaaaggaagaaa
atcattcttgacaagtcaaatgcattagcaaaaagtgttaatgggcgagttgttgtccag
cagaacttacttaatgaggttgcaaatctcgtcgaagctcctgtgccattaattggaaag
tttaaggaatcatttttagaattaccagatgagctattaactattgttatgcagaagcac
cagaaatatttttccattactgatgagagtggaaagctattgccttactttattgctgtt
gctaatggtgcaattaatgaggatgtggtgaggaaaggaaatgaagcagttctcagggca
cgctatgaagatgcgaagttcttctatgaggtggacacaaggaaaaggttttctgaattt
cgagatcagcttaagggaattcttttccacgaaaagctggggacgatgctggataagatg
aaccgtctagaaaagatggtaactaagctttgtttagccctcgaagttgatgaagacctg
cttccagttgtggaggaggctgcctcacttgctctgtcagaccttgcaacttctgtggtt
acagaatttacgtcgctgtcaggaataatggctcgtcattatgctctccgagatggctat
tcagagcagattgcagaagctttgctggaaatcacacttcctagattttccggagatgtc
atccctaaaacagatgcaggaatggttttggcaataggtgatagattggatagcctcgtt
ggtctatttgctgctggttgccagccaagttcaacaaatgacccatttggccttagaaga
atatcttatggcttagttcagattttggtcgagaaggataaaaatgtcaacttcaaacat
gctctagatattgcagccagcgtacaaccaataaaggttgaggcaaacaccctagacgat
gtgtatcaatttgttactcgaagactggaacagcttctggttgacaacggagtaagccct
gaagtagttaggtctgtcctagcagagcgtggaaatgatccttgtctggcagcacgaact
gcatacaagatggaaaagctaagcaaaggtgagatctttccgaagatagtggaagcatat
tctcgtcccacacgaattgtccgtgggaaagatgttgatgttggagttgaggtggatgag
agtgtatttgagacttcccaagagaaagagctgtggagcatttacacctccatcaaagat
cgaattcacagtggcataggaatcgaggagttcactgagatatcgacgcagttggtggag
ccgctggaggatttcttcaacaatgtgtttgtgatggtggaggaagaaagagtgagaaag
aacagactcgctcttctaaataacattgccagtcttccctcaggaatcgctgacctttca
tttttgcctggtttttga
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