Brassica oleracea (wild cabbage): 106300964
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Entry
106300964 CDS
T04124
Name
(RefSeq) protein argonaute 7-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106300964
03036 Chromosome and associated proteins [BR:
boe03036
]
106300964
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106300964
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106300964
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106300964
microRNA pathway
RISC loading complex
106300964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
Piwi_N
DUF6079_5th
Motif
Other DBs
NCBI-GeneID:
106300964
NCBI-ProteinID:
XP_013592711
UniProt:
A0A0D3CXP5
LinkDB
All DBs
Position
C6:29901298..29904966
Genome browser
AA seq
980 aa
AA seq
DB search
MEEKTKNHHTNKHIRNSKSRTPLLHKPPPPFHHVHTNPLLFPSSYPHQSLNLLSSSIHSS
YYYYYCFYSQFHNTLPPPPPPPLPFHPSPPLLPLPPPEQRFFNSISKPLSLPPVVERKQK
KQVFEHKDNSRNIKVISGSTEAALVVAKRPDSGGQEGSVIYLLANHFLVKFDPSQKIYHY
NVDITPHPSKEIARLIKQKLVETEGEDSFSGSVPAFDGRQNIYSPVEFQEDKLEFFVNIP
IQPCKTLLKCGGDLREKQPQKKTDKLFRVSMRLVSKFDGKKQSERWTPLPQEYIHALDVI
LRENPTEKCTSIGRSFYSSSMGGSKEIGGGSVGLRGFFQSLRQTQQGLALNIDLSIAAFH
ESIGVIAYLQKKLEFLKDLSRNKGRELSLEERREVEKALKNIRVFVCHRETVQRYRVFGL
TEEITESLWFQDRDGKQLRVMSYFKDHYGYEIQYKSLPCLQISRTRPCYLPMELCVICEG
QKFLGKLSDDQTAKIMQMGCQRPNERKDTIDKVMSGPVGPSSGNQTREFNLEVTREMTLL
KGRVLQPPKLKLDRPRSLVVKGTRWALMSIGGSSDQKSTVPKFIHELTQKCEHLGVFLSK
NTMSTTFFEPSHILNNVSLLELKLKEIQRAASSNLQLIICVMERKHKVYGDLKRIAETKI
GVVTQCCLYPNITKLNSQFVSNLALKINAKIGGTMSELYNSIPSHIPRLFRLDEPVIFMG
ADVTHPHPFDDCSPSVAAVVGSINWPEANRYVSRMRSQTHRQEIIQDLDVMVKELLEDFH
KALKKLPNRIIFFRDGVSETQFKKVLQEELQSIKAACSNFDHYNPTITFAVVQKRHHTRL
FRRDPVCRHENIPPGTVVDTVITHPKEFDFYLCSHLGAKGTSRPTHYHILWDENEFTSDE
LQRLVYNLCYTFVRCTKPVSIVPPAYYAHLAAYRGRLYIERSSETNGGSMNPSCVSRVGP
PRTIPLPKLSDNVKNLMFYC
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaaccaagaatcatcacactaacaaacacatccgcaactccaaatcaaga
actcctcttctccacaagcctcctcctccttttcaccatgttcacacaaaccctcttctt
tttccttcctcttatccccaccaaagtctcaatcttctatccagcagtatccactctagc
tactactactactactgcttctactctcagttccacaacactcttcctcctcctcctcct
cctcctctcccttttcatccttctcctccattacttcctcttcctcctcctgagcaaaga
ttcttcaactcaatctccaaaccgctctctcttcctccggttgtggagagaaagcagaag
aagcaagtttttgaacataaagacaacagtagaaacatcaaagtgatcagtgggtccaca
gaagcagcattagtggttgctaaaagacccgactctggtggtcaagaaggctctgtcatc
taccttctggccaaccattttcttgtcaagtttgatccttcacagaagatttaccattac
aacgttgacatcactccacacccttcaaaagaaatcgctcggctgatcaaacagaagctc
gtggagacagaaggggaagatagcttctcaggttctgttccagcttttgatggtaggcaa
aacatttacagccctgtggagtttcaagaagataagctcgagttctttgttaacatccct
atccaaccctgcaagactttgttgaagtgtggtggtgacttgcgtgagaagcaacctcag
aagaagactgataaactgtttagggttagcatgaggcttgtgtccaagtttgatggaaag
aaacagagtgaaaggtggactcctctgcctcaagagtacattcatgctcttgatgtgatc
ttgagagagaatccaactgagaaatgtacatctattggaagatctttttactcaagctcc
atgggtggatccaaggagattggaggaggatccgttggactcagagggtttttccagagc
cttagacagactcagcaaggtttagccctaaacatagacctctcaatagcagcattccat
gaaagcattggggtaatagcttacttgcagaagaagctagagtttctcaaggatctctct
aggaacaaaggcagagagcttagcttggaagaaaggagagaagtggagaaagctcttaag
aacataagagtctttgtttgccatagggaaactgttcaaaggtaccgtgttttcgggtta
acagaggagatcaccgagagcttatggtttcaggatagagatgggaagcagttaagggtt
atgagttacttcaaagatcattatggttatgagattcagtacaagagcttgccgtgtctt
cagattagtaggacaagaccttgttaccttcctatggagctgtgtgtgatatgtgaagga
caaaagtttcttgggaagctttcagatgatcaaactgcaaagattatgcaaatgggttgt
caaagacctaatgaaaggaaagatactattgataaagtcatgtcaggaccggtcggtcca
tcaagtgggaaccaaacgagagagttcaacttggaggtcactagagagatgacattgctg
aaaggaagagtccttcagcctccaaagctgaaacttgacaggccaaggagccttgtagtt
aaaggaactcgatgggctttgatgagtattggaggcagctcagatcagaaatctaccgtt
ccaaagttcatacacgagcttactcaaaaatgtgagcacttgggagtcttcctaagcaag
aacacaatgagcacaaccttctttgaaccgtcacacatactcaacaacgtttctcttctc
gagttgaagctgaaggagattcaaagagcagcatcaagcaatctccagctgataatctgt
gtaatggagaggaaacacaaagtgtatggagatttaaaaaggatagcagagacaaagata
ggagttgtgacacagtgctgcttataccctaacatcactaagcttaactctcagtttgtt
tcaaacttggctctcaagataaacgccaagatcggtggaaccatgtccgagctttacaac
tcaataccttctcacatccctagattgtttaggctcgacgagccggtgatcttcatggga
gctgatgtaacgcatcctcatccgtttgatgattgcagcccttctgttgcagctgtggtc
gggagcataaactggcctgaagctaaccggtacgtctcgagaatgaggtctcagactcat
aggcaagagatcattcaggatcttgacgtgatggtcaaggaacttcttgaagattttcac
aaagccctaaagaagcttccgaatcggatcatatttttcagagacggtgtgagcgagaca
cagttcaagaaagtcctccaagaagagcttcaatccatcaaagccgcttgttctaacttt
gaccattacaacccgaccatcactttcgccgtggtccagaagagacaccacacgaggctg
ttccggcgcgatcctgtctgccgccacgagaacatccctccgggaacggtggtcgatacg
gtgataactcatccgaaagagtttgatttctatctttgtagccacttgggagcgaagggc
acgagcaggccaacgcattaccacatcctttgggacgaaaacgagtttacttcggatgag
ttacagagacttgtgtataacttgtgttacactttcgtgaggtgcacgaaacctgtttct
atcgtgccaccggcttattacgctcaccttgcggcgtacagaggaaggctatacatcgag
agatcatctgaaactaatggagggtccatgaatccatcttgtgtctctcgagtgggtcct
cccaggacgattccattgcctaaattaagtgataatgttaagaatctcatgttttactgt
tga
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