Brassica oleracea (wild cabbage): 106301080
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Entry
106301080 CDS
T04124
Name
(RefSeq) sm-like protein LSM36B
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106301080
09123 Folding, sorting and degradation
03018 RNA degradation
106301080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106301080
03041 Spliceosome [BR:
boe03041
]
106301080
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106301080
mRNA degradation factors
5'-3' decay
Lsm complex
106301080
Spliceosome [BR:
boe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106301080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
106301080
NCBI-ProteinID:
XP_013592846
UniProt:
A0A0D3CUV2
LinkDB
All DBs
Position
C6
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AA seq
91 aa
AA seq
DB search
MSGSGDKVVGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTVKGPLADGA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaagtggagataaagttgttggaaccacaaagacacctgctgatttcctcaaa
tccatccgtgggagacccgttgttgtcaaactcaactctggtgttgattatcgaggcatt
cttgcttgtcttgatgggtatatgaacatagcaatggagcagacagaggagtatgtcaac
ggccagctcaagaacaaatacggtgatgcctttatccgtggaaacaatgttctttacatc
agtacagtgaagggacccttggcggacggagcttag
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