KEGG   Brassica oleracea (wild cabbage): 106301080
Entry
106301080         CDS       T04124                                 
Name
(RefSeq) sm-like protein LSM36B
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03018  RNA degradation
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106301080
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106301080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106301080
   03041 Spliceosome [BR:boe03041]
    106301080
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106301080
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106301080
Spliceosome [BR:boe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    106301080
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 106301080
NCBI-ProteinID: XP_013592846
UniProt: A0A0D3CUV2
LinkDB
Position
C6
AA seq 91 aa
MSGSGDKVVGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTVKGPLADGA
NT seq 276 nt   +upstreamnt  +downstreamnt
atgagtggaagtggagataaagttgttggaaccacaaagacacctgctgatttcctcaaa
tccatccgtgggagacccgttgttgtcaaactcaactctggtgttgattatcgaggcatt
cttgcttgtcttgatgggtatatgaacatagcaatggagcagacagaggagtatgtcaac
ggccagctcaagaacaaatacggtgatgcctttatccgtggaaacaatgttctttacatc
agtacagtgaagggacccttggcggacggagcttag

DBGET integrated database retrieval system