Brassica oleracea (wild cabbage): 106301164
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Entry
106301164 CDS
T04124
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03020
RNA polymerase
boe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106301164
09124 Replication and repair
03420 Nucleotide excision repair
106301164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106301164
03400 DNA repair and recombination proteins [BR:
boe03400
]
106301164
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106301164
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106301164
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
106301164
NCBI-ProteinID:
XP_013592961
UniProt:
A0A0D3D418
Structure
PDB
PDBj
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All DBs
Position
C7:complement(7823742..7825494)
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AA seq
319 aa
AA seq
DB search
MDSGATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNS
SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLD
VTSKDLYSADPTVTPVDFGDSSGADSSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKW
SPAATVTFMYEPDIIINEDMMDTLTDDEKIDLIESSPTKVFDFDAVTRQVVVVDPEAYTY
DEEVIKKAEAMGKQGLIEIRPKDDSFIFTVESTGAVKASQLVLNAIDLLKQKLDAVRLSD
DTVEADDQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggtgccacttaccagagattcccaaaggtgaagatccgtgagctgaaagat
gactacgccaagttcgagcttcgtgacaccgatgtctccatggcgaacgctctccgtcgc
gttatgatctcggaggtccccacggtcgcaatcgatctggtcgaaatcgaggttaattcc
tctgttctcaacgatgagttcattgctcatcggttaggtctcatccctctcactagcgag
cgtgcgatgagcatgcgcttctctcgagactgcgatgcttgcgacggagacggacagtgc
gagttttgctctgttgagtttcgtcttagcgctaaatgtgtcactgaccaaaccctagat
gttactagtaaggatctgtacagcgctgatcctactgttactcctgttgatttcggtgat
tcatcgggagctgattcaagcgagcaaaggggaatcatcatagtgaaactgagacgggga
caagaactgaagcttagggcgatagctaggaaaggaatcgggaaagatcacgctaaatgg
tctcctgcagccactgttacgttcatgtatgagcctgacattattatcaatgaagatatg
atggacactttgacagacgacgaaaagattgacttgattgagagcagcccgaccaaagtt
tttgactttgatgctgtcaccagacaggttgtggtggttgatccagaagcatacacttac
gatgaagaagtgatcaagaaagcagaagccatggggaaacaagggctcattgagatccgt
ccgaaagatgacagttttatattcactgttgaatccacaggtgcagtgaaggcttcgcag
ctggtactgaatgccatagatctcctgaagcagaagctcgatgcagtccgtctctcagac
gacactgttgaagctgatgatcagtttggcgaactaggtgcacatatgcgcggaggatga
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