Brassica oleracea (wild cabbage): 106301220
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Entry
106301220 CDS
T04124
Name
(RefSeq) auxin response factor 16
KO
K14486
auxin response factor
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106301220
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
106301220
NCBI-ProteinID:
XP_013593026
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Position
C7:complement(45274166..45277322)
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AA seq
654 aa
AA seq
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MINVMDPMKSGSEKGLDPQLWHACAGGMVRMPPVNSKVFYFPQGHAENAYDHVDFKNLPI
PPMVLCRVLAIKYMADPESDEVFAKLRLIPLKDDDHEYGDGQEGNGFESNSEKTPSFAKT
LTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRH
LLTTGWSNFVNQKKLVAGDSIVFMRAESGDLCVGIRRAKRGGIGNGPDYSPGWNPIGGSC
GYSSLLREDESNSLRRSNCSLADRKGKVAAESVIEAATLALSGRGFEVVYYPRASTSEFC
VKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPIRWPNSPWRLLQV
AWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSF
PSNPLIRSNPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNRPPPPPQPSALPLS
QPLGLRNIDSRNEKGFCFLTMGTTPCNDDTESKKSHIVLFGKLILPEEQISEKGSTDTAN
TSGGSKLSSSDEGSPCSNKAHDAAGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLS
DMFGIQKAEMLSSVLYRDASGAIKYAGNEPFSEFLKTARRLTIVTEQGSESVVV
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgataaatgtaatggatccgatgaaaagcggatcagagaaaggtttagatccacagcta
tggcatgcatgcgctggcggcatggtccgtatgccacctgtgaactccaaagtcttctac
ttccctcaaggacacgctgaaaacgcttacgaccacgtagatttcaagaacctccctatc
cctcccatggtcttatgccgtgtcttggccatcaagtacatggctgatcctgaatccgac
gaggttttcgccaaactgagactgatccctctaaaagacgacgatcacgagtacggagat
ggtcaagaaggtaacggtttcgagagtaacagcgagaagactccttcctttgccaagact
ctgactcagtccgatgctaacaacggtgggggcttctctgtcccgcgctactgcgcggag
acgatcttcccgaggctggattacaacgccgagccgcctgttcagaccattctcgccaaa
gatgttcacggagatgtatggaagttcagacatatctacagaggcacgccgcgtcgacat
ctcctcactacagggtggagtaacttcgtgaaccagaagaagcttgtggcgggagactcc
atcgtcttcatgagagctgagagtggagatctctgcgtaggcatcaggagggctaagaga
ggagggattgggaacggacctgattattcgcctggttggaaccctatcggtggaagctgc
ggctactcttctcttttgagagaagatgagagtaatagtttgaggaggagtaactgttct
cttgctgatagaaaaggaaaggtggcggctgagtctgttatagaggccgccacgcttgct
ttaagtggaaggggctttgaggttgtgtactatcctagggctagcacgtctgagttttgc
gtcaaggcgttggatgctagggcagcgatgaggattccttggtgctcaggtatgaggttt
aaaatggcgtttgagactgaagattcgtcgaggataagttggtttatggggactgtgtcg
gctgttagtgtctctgatcctatccgttggcctaactctccttggcggcttctacaggtg
gcttgggatgagccggacctactccaaaacgtgaagcgggttaacccgtggttagttgaa
ctggtatccaacgtacaccccatcccactcacgtcgttttcgccgccaaggaagaagatg
aggcttcctcagcatccggattacaacaacttaatcaactcaatcccagtaccttctttc
ccaagcaaccctctcataagatcaaacccgttaagctctgttctggacaacgttcccgtg
ggtttacagggagccaggcataatgctcatcagtactacgggttatcatcttctgatctc
caccattactacttaaacagacctcctcctcctccgcaaccatcagctctccctctttct
cagccattagggttgcgaaacatcgatagcagaaacgagaaagggttctgtttcttgacc
atggggacaacaccgtgtaatgatgatacagaatctaaaaagtctcacattgtcttgttc
gggaagctgatactacctgaggagcagatctcagagaaagggtcaacggatactgcaaac
acgtcaggcggatcgaaactatcttcatcagacgaaggttcaccttgctccaacaaagct
catgatgcagcaggtttggagacagggcactgtaaagtgtttatggagtcagacgacgtc
ggtcgaacgttagacctgtcagttcttggctcgtacgaggagctgagtaggaaactctct
gacatgtttggtattcaaaaggctgagatgttgagctctgttctctatagggatgcatct
ggagccatcaagtacgcaggaaacgaacctttcagtgagttcttgaagacagctcggaga
ttgacgattgtgactgagcaaggaagcgagagcgttgtagtataa
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