Brassica oleracea (wild cabbage): 106301334
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Entry
106301334 CDS
T04124
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106301334
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
106301334
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GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_NusA_1st
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
106301334
NCBI-ProteinID:
XP_013593157
UniProt:
A0A0D3DG64
LinkDB
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Position
C7:43906108..43908507
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AA seq
495 aa
AA seq
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MLMAAVADSAENGATNFPENETLKPSGVSASSLLNETTAAFPESNQTDTLTAETAPDAND
SAAERWPGWPGDCVFRVIVPVSKVGAIIGRKGDIIRKMCEETRARIKVLDGPTTTPDRIV
MISAKEEPEAYMSPAMEAVVRVFRRVSGLPDSDDDEDLQNAGGAFSSVRLLVASSQAINL
IGKQGSSIKSIVENSGASVRILSDEDTPFYAAQDERIVDLQGEALKIVKALEGVVGHLRK
FLVDHSVVPLFEKQYLARVSQVRQEEPLANNKSVLHAALSNAIESDLMARREALFLERDT
RVESFVQPSGASIYSQDPALSARHSPGLARVSAAFVTQVSQTMQIPFSYAEDIIGLEGAN
IAFIRRRSGATITIQESPHPDQITVEIKGTSSQVQTAQQLIQEFISNHKEPASVSGGYAR
VDTGYVPAYPPQLSNLQEPLASSYMGTETGQYRPTAYSQLAGPSASTYTPSLNGQSYGTE
YRPASDAGGYNTYNL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggccgccgtcgccgattccgccgagaacggtgctacaaacttccccgagaat
gaaaccctcaaaccttcgggagtctctgcctcctcattgctcaacgaaaccaccgccgcc
ttccccgaatcgaatcagacggataccctaactgccgagactgcccccgatgcgaacgat
tccgcggcggagagatggccaggatggcctggagattgcgtgtttcgtgtgatcgttcct
gtatctaaggtcggagctataatcggacgcaaaggagatatcatcagaaagatgtgcgag
gagactcgcgctcgcatcaaagtcctcgacggccccaccacgactcctgatcgcatcgtg
atgatatctgcaaaggaagaaccagaggcctacatgtcccctgcgatggaggcagttgta
agggtgttcagaagagtttcggggttgcctgatagtgatgatgatgaggatcttcagaac
gctggaggtgccttctcttcagtgcgtttattagttgcatcttcgcaggcgattaattta
atcgggaaacaagggtcctctattaaatctatagtagagaactctggtgcatccgttcgc
attttatcagacgaggacacaccgttttatgctgcgcaagatgagaggatagtcgatttg
cagggggaagctttaaagatcgtaaaagcgttagaaggtgttgtaggacacctgaggaaa
tttctagtcgaccattctgtggttcctctcttcgagaagcaatatctagctagagtctct
caagttcgtcaggaagaaccgttagctaacaacaagtcagttctccacgctgctttgtca
aatgcaatcgagtctgatctcatggcacggagggaagctctgtttttggagcgggatact
cgggtggagtcatttgttcagccttcgggagcttccatctacagtcaggatcctgcactg
tccgccagacactcccctggcctcgctcgagtttctgctgcttttgttacacaggtatct
caaacgatgcaaatacctttctcctatgcggaggatatcattggtttagaaggagccaat
atagccttcatccgtagaagaagcggagctaccattaccattcaagagagtccacatcct
gatcaaatcacagtggaaatcaaagggacatcttctcaagtacaaactgctcagcaacta
attcaagagttcatcagcaatcacaaggaaccggcttcggtttcagggggatatgctaga
gtggatactggttatgtacctgcgtaccctcctcagctaagcaaccttcaagagccgctc
gcgagcagctacatgggcacagagacggggcagtacagaccaacagcatactctcagctt
gcgggtccgtcggcgtccacctacacgccgtcactgaatgggcaaagttatggaacagaa
tatagaccagcttctgatgctggtggctacaacacttataatttatga
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