Brassica oleracea (wild cabbage): 106301406
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Entry
106301406 CDS
T04124
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
boe01002
]
106301406
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106301406
Enzymes [BR:
boe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106301406
Peptidases and inhibitors [BR:
boe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106301406
Ubiquitin system [BR:
boe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106301406
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
BBP2_2
Motif
Other DBs
NCBI-GeneID:
106301406
NCBI-ProteinID:
XP_013593248
UniProt:
A0A0D3DEQ6
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Position
C7:40738262..40742607
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AA seq
647 aa
AA seq
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MLIADSDLPPPISPPPPLTPSPIETLDESIGVHDAVQSLALSSPNQVEVEEAVSVETLTV
PSLVPVEPFSDICCLSDNYKRWTPNVSPGFDTDDESTSYWSTNQPLYSFIQDPPEMIDEP
TGVGVGLWNLGNSCFVNSVFQCLTHTLPLIESLCSYEPLELCNCGNEWFCVRSAFKGHLE
AALTTSRCSIAPYSFLNNLNYFSADFRRYQQEDAHEFLQAFLDKLERCCLEDPSSDRDRD
RDPDDSVSSQDVNLVQRIFGGRLVSELRCCNCNSVSETFENSLGLSLEIEHVDNLQSALD
SFTRVEKLDEPMTCDNCKEKVSKEKQLLLYKLPQVVTFHLKRFKNNGFFMEKIFNHVKFP
LEIDLQPYMVRSQNNEVTAKYRLYAFVEHFGSLVYGHYSSYVRSAPKTWHQFDDKQVTRI
DEDRVLSQDAYILFYAREGIPLFSSTFQEVHPLVEASLQNPSPNSVLDPTSGECSSEISY
ENAYKSNKLLSENSAGVIQHVKPEERYVSLSNEFDEDALLQSTESSGEDDDNSNDSCTEK
EVDSRLDIERATTGDDSVPYLMVQDQDSSQKQQDGTFLIQLEKLEATKNQEEEEPCKQPL
LIRHVGESKENEIVHRRGPVKKPSPRERVLDQGISTTGSPPKKLKKA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctgattccgacttgcctccgccgatttcacctcctccgccgctaaccccc
agcccaatcgaaaccctagacgagtcgatcggagtccatgatgcagttcaatcgctggct
ctttcttccccgaatcaggtggaggtggaggaggcggtctcagtcgaaaccctaaccgtg
ccttctctggttcccgtcgagccgttctctgatatttgttgtttgtcggataattacaaa
cggtggactcctaacgtctcgcctgggttcgatactgacgacgagtctacgagttactgg
tccacgaaccaacctttgtatagtttcattcaagatcctcccgagatgatcgacgagccc
actggtgttggtgttgggctttggaatctaggcaacagttgtttcgttaactcggtgttt
cagtgtttgactcacactctccctcttatcgagagtctttgctcttacgaacctcttgag
ctttgtaactgtggcaatgagtggttttgtgttagaagtgcttttaaaggtcacttagag
gctgcgctgacgacttcacgatgttcaattgctccctactccttccttaacaatcttaac
tatttttcggctgacttcaggcgttaccagcaagaagacgctcatgagtttctacaagcg
tttttggataagttggagagatgttgtttggaggacccgagtagtgaccgtgaccgtgac
cgtgaccctgatgactctgtctcttctcaagatgttaacttggttcagcgtatctttggt
ggtcgtctcgtcagtgagcttcgttgctgcaactgcaactctgtttctgagacatttgaa
aactctcttgggttgagtttggaaatcgaacatgtggataaccttcagagtgcgctggat
tcgttcacccgtgtggagaagcttgatgagccaatgacttgtgataactgtaaagaaaaa
gtttcaaaggagaagcagctcttgctctataagctgccacaggttgtcacattccatctg
aagagattcaagaataatgggttttttatggagaagattttcaatcatgtcaagtttccg
ttggagatagacttgcagccatatatggtcagaagccagaataacgaagttactgcaaaa
tatcgtctttatgcttttgtggagcattttgggtcattagtttacggtcattactcttcc
tatgtgaggtctgccccaaagacatggcatcaatttgatgacaagcaggtcactagaatc
gatgaagatagagtgttatcacaagacgcatatattcttttctatgcaagagaagggatc
cccttgttttctagcacttttcaagaggtgcatccattggttgaggctagcttgcaaaat
ccttcgccgaactctgtccttgatcctaccagcggggagtgttcatctgaaatcagctat
gagaatgcatataaatccaacaaactactctctgaaaactcagcgggagtaatccaacat
gtcaagccagaagaaagatatgtttccctctccaacgagtttgacgaagatgcgttgtta
caatcaacagagtcaagtggcgaagatgatgataattctaacgattcatgcactgaaaaa
gaagtagattctcgcttagacattgaaagagctaccactggtgatgactctgttccttat
ctcatggttcaagatcaagactcgtctcagaaacaacaggatggaactttcctaattcaa
ctcgagaaattggaagccacaaagaatcaagaagaggaagaaccttgcaagcagccatta
ctaataagacacgttggagagtccaaggaaaacgaaattgttcatagaagaggccccgtg
aagaaaccttcacctcgtgaaagagtgttggaccaaggcatatctacaactggttctcca
cctaaaaaacttaaaaaagcatga
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