Brassica oleracea (wild cabbage): 106301605
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Entry
106301605 CDS
T04124
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106301605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106301605
Spliceosome [BR:
boe03041
]
Common components
Common spliceosomal components
SR proteins
106301605
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
RRM_fung
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
106301605
NCBI-ProteinID:
XP_013593506
LinkDB
All DBs
Position
C7:43741312..43743574
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AA seq
286 aa
AA seq
DB search
MVRFVFMVATAALWEQHTLDYKPCIFAVYVACGEAIRSLPSAMAGGKSERYFCSGFAFEY
IDNERDAEDAIQGLDRIEFGRKGRRLRVEWTKGERGGDRRSGGGDSRISSSSMRPSKALF
VINFDAENTRTRDLERHFEPYGKIVNVRIRRNFVFVQYEEHEDATRALAVTNNFKDTVLR
DALNGEGGHLVLAKRKRGSPDYGRGGSPVAAYRKERTSPGYGRRRSPSPPYKRSRRGSPE
YGESPRRRERNSRSPDNKRKTLKKESPSGEVESPTERRGRWRLQWC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggttcgttttgtcttcatggttgcaaccgcagctctttgggagcaacatacattagac
tacaagccatgtattttcgctgtgtatgtcgcctgtggtgaggcgataaggtccttgcca
agcgccatggctggcggcaaaagcgagcgctatttttgttcaggttttgctttcgagtac
attgataacgaaagggatgctgaagatgcaatccaaggccttgaccgtattgaatttggg
cgtaaaggacgcagactccgtgttgagtggacaaagggtgaacgtggaggtgatagaaga
tctggcggtggtgattcaaggatatcctcatccagcatgagaccttccaaggctctcttt
gtgattaacttcgacgccgagaacacaaggacacgggatctagagagacactttgagccg
tatggcaaaattgtaaacgttagaatcaggagaaactttgtgtttgtccagtacgaggag
cacgaggatgccacgagagcactggctgttactaataactttaaggacacagtcctgaga
gacgccctgaatggagaaggcggtcacctagtccttgcaaagagaaaaagaggaagccct
gactatggcagagggggtagtccggttgctgcatacagaaaggagcgaacaagtcctggt
tatgggagaagacgtagcccaagtcctccttacaagagatcaaggcgtggcagtccggag
tatggtgagagcccgaggaggagggagaggaacagtcgtagtcctgacaacaagagaaag
acgttgaagaaggaaagcccaagtggtgaagtggaaagcccaactgaaaggagggggaga
tggaggctacaatggtgctga
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