Brassica oleracea (wild cabbage): 106301665
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Entry
106301665 CDS
T04124
Name
(RefSeq) long chain base biosynthesis protein 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00600
Sphingolipid metabolism
boe01100
Metabolic pathways
boe04382
Cornified envelope formation
Module
boe_M00094
Ceramide biosynthesis
boe_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106301665
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106301665
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boe01007
]
106301665
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
106301665
Amino acid related enzymes [BR:
boe01007
]
Aminotransferase (transaminase)
Class II
106301665
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
DUF6042
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
106301665
NCBI-ProteinID:
XP_013593570
UniProt:
A0A0D3DHZ9
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Position
C7:complement(47253060..47255784)
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AA seq
480 aa
AA seq
DB search
MDTNLVEMFRAGLNWVTMALDAPSARVVLFGVRIQWHIFVEVLLGFVIVILLSQKSYKPP
KRPLTEQEIDELCDEWVPEPLIPPITEDMMHEPPVLESAAGPHTTVNGKDVVNFASANYL
GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCETRISKFLSTPDTILYSYGLS
TMFSTIPCFCKKGDIIVADEGVHWGIQNGLQLSRSTIVYFKHNDMDSLRTTLEKIMTKNK
RSKNLRRYIVAEAVYQNSGQIAPLDEIVKLKEKYKFRVILDESNSFGVLGRSGRGLAEHH
GVPIEKIDVVTAAMGHALATEGGFCTGNARIIDYQRLSSSGYVFSASLPPYLASAAITAI
DVIDQNPELLVKMKQNIALLWKGLEDIKGMSLASDPESPIVFLKLEKSSGSTKEDLLLLE
KMADRALKEDSLLVVSSKKSFLDKCRLPVGIKLLVSAGHSESDLVKVSESLKRLASELLL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggatacgaatctggtggaaatgtttagggccggtttgaactgggtgacaatggctctg
gatgctccttcagctagagttgtcttgttcggtgtccgaatccaatggcacatctttgtg
gaagttttgttgggttttgtcattgtcatcctcctctctcaaaagagttacaaacctccc
aagagaccgttaactgagcaggaaatagatgagctgtgtgatgaatgggttcctgagcct
cttatacctccaattacagaagacatgatgcatgagccaccagttcttgaaagtgctgct
ggaccgcatacaacggttaatggaaaagacgtggtgaattttgcgtctgctaattatctt
ggactcattgggcacgagaagttgctggaatcatgcacttctgcgttggagaaatatgga
gttggttcttgtggtcctcgtggattctatggtactattgatgttcatcttgattgcgaa
accagaatatcgaaatttttgagtactcctgatacaatcctctactcttatggactttcc
acgatgttcagcaccattccttgtttctgtaaaaaaggcgatatcattgttgccgacgag
ggtgttcactgggggatacaaaatggactccagctttcaagaagtacaatcgtgtacttc
aagcacaacgacatggactctctccgtactactctcgagaaaatcatgacaaagaacaag
cgctcaaagaacttgaggcgttacattgtagctgaagctgtatatcagaactctggtcaa
atcgcaccgctcgatgagatagtgaaactgaaagagaagtataaatttcgtgttatattg
gacgaaagcaactctttcggcgtgcttggccgttccgggagaggtcttgcagagcatcac
ggtgtccctattgagaagatagatgttgtgactgctgcaatgggccacgcactagccaca
gagggtggattctgcaccgggaacgcccgcatcatcgattaccagagactcagcagttca
ggatatgtgttctctgcctctttgccaccgtaccttgcgagcgctgctatcaccgccatc
gatgtcattgatcaaaaccctgagttgttagtcaagatgaagcagaacattgctctgtta
tggaaaggtttggaagacatcaaggggatgtcgctagcaagcgaccctgagtcgcctatc
gttttcttgaagttagagaaatcgagtggttcgactaaagaggacttgcttctactcgag
aaaatggctgatcgtgcgctgaaggaagactcgttgttggttgtgagctctaagaagtcg
tttcttgataagtgccggttgcctgtggggatcaaactcttggtctcagcgggacattca
gagtctgatcttgttaaagtatccgagtcgctgaagagactcgcttcagagcttctactc
taa
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