Brassica oleracea (wild cabbage): 106301681
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Entry
106301681 CDS
T04124
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106301681
Transcription machinery [BR:
boe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
106301681
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
106301681
NCBI-ProteinID:
XP_013593585
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Position
C7:37743043..37745905
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AA seq
510 aa
AA seq
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MGVVFISTSAARSPLGLSTDLLTQRSSLKKPSIVAFKADDSIPTNSSLIIVKQKEKRVVA
TRRKPCKDTKTRKPLDQNVAPSCPLDYNEAAARLESIYKLSPPPATSLEEEDGIDGSSKV
RAPRRRKRKESGEEKKVVVRNNVKKEKRLTLDKRIALKRNVQEKPVSASSSAREKVTKKQ
QEEEKIERLVRDYSASNDIVSLDWKKMKIPPVVSSAEHTWLFKLMQPMKALLQVKDELQK
SMGREPREAEIAGEINMSVAEVKRKIEIGRAARNKLIKTNLRLVLFVMNKYFQDLTNGPK
FQDLCQAGMRGLITAIDRFEPKRKLRLSTYGLFWIRHAVIRSMTTSNFTRVPFGLESVRV
EIYKAKMELLFELGRLPTEEEVVKRLKISPERYREVLRAAKPVFSLNSKHSVTQEEFIKG
ITDVDGVGADNRRQLALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNI
SREMVRKHEVKALMKLKHQARVDYLRQYII
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgtttatttcaacttcagctgcaagatcacctctggggctaagcactgat
cttctgacacaacggtcttcactgaaaaagccatccattgttgctttcaaagcagatgat
tccattcccaccaactcatctctgatcatcgtcaagcaaaaggagaagagagtagtagct
acgaggagaaagccctgtaaagacacgaaaacacgaaaacctctagatcaaaacgtggct
ccttcctgtcccttagattacaacgaagccgccgcgagactagaaagcatttacaagctt
agtcctcctcctgcaacatccctcgaggaagaagatggtatcgatggcagctccaaagtg
agagctccacggaggaggaagaggaaagagagtggagaagagaagaaagtagttgtgagg
aacaatgtgaagaaagagaagcgtctgactcttgataaacggatcgcgttgaagagaaac
gttcaagagaaaccggttagcgcttcttcttctgctagggagaaagtaacgaagaagcag
caagaggaggagaagatcgagaggctagtgagagactattcagcttctaatgatatagtc
agcttggactggaagaaaatgaagatacctcctgttgtttcatccgctgaacatacttgg
ttgtttaagttgatgcaacctatgaaggctctccttcaagtgaaagatgaattgcaaaag
agcatgggaagagagccgagagaagctgaaatagctggagagatcaatatgagtgtggct
gaagtgaaaaggaaaattgaaattggtagggctgcaaggaacaaacttattaagaccaat
ctccgccttgtattgtttgttatgaacaaatattttcaagatttaaccaacggaccgaag
ttccaagacctgtgtcaagccggtatgagagggctcatcacagccattgaccggtttgag
cctaaaaggaagctacgtctctcaacttatggcttgttttggatcagacatgccgtcata
cggtctatgacaacctctaacttcactcgtgtcccttttggacttgaatcggttagagtg
gagatctacaaagcaaagatggagctcttgtttgagcttggaagactacctacagaggaa
gaggtggttaagagactcaagatctcacctgagagataccgcgaagtcttgagagcagct
aaaccggttttctcactaaactcaaaacattcggttactcaagaagagttcatcaaaggg
atcacggatgttgatggtgtgggagctgataaccggagacaacttgctctcctcaggctc
gctctcgacgacgtgctggattcattgaagccgaaagagagtctggttattagacaaaga
tacggtctcgatgggaaaggagacaggacgctaggagagatagctgggaatctcaacatc
tctagagaaatggtgaggaaacatgaagtcaaggctttgatgaagctcaagcatcaggct
cgagttgattaccttcgtcagtacatcatctga
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