Brassica oleracea (wild cabbage): 106301993
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Entry
106301993 CDS
T04124
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106301993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106301993
03036 Chromosome and associated proteins [BR:
boe03036
]
106301993
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106301993
Coactivators
SAGA/TFTC/STAGA complex
106301993
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106301993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
106301993
NCBI-ProteinID:
XP_013593949
LinkDB
All DBs
Position
C7:18077201..18082001
Genome browser
AA seq
769 aa
AA seq
DB search
MDPSLLKLLEEDDEDESMHSKEDVDAFQASLIREIEGGNHSWSQQFAAWNNGITQDANTN
KLHILESTQMKEQQQQSVLGSQDRELKPEDESPVQHNHNLPQYHLQPGGLSENPSHVPQA
SDLQSRNNSVSTEPENPQPLYMKLQSISVQRAHGLEQPVGSVNLGPTQLQVGELFRLLRP
QVDKDRGTQLNTLFYKFKSNEVTKESFLRQARNILGERMILWAVRKLQQQQGNKGVKVPD
GPNHCREPFTSADQSLIQSLTEGISAKKSDTCGSHDNQLHSTSSDTLSSSASVHGLHNSE
RPVSVNGPAMVHGGHIFPNQNNSSLPLNPAPCQGSVTKDQTMSNDQTVAHVKQKLTDQSF
DQVRKPCPVVRQDVSNVPMEQRNGNPRRSDDDLLKQSSEMVLSAPTTHANFASPSVKTQL
DSSTMVNFSAPAATILPGTIVRTTQGQKKTLEAQGSSLPPLSKRQKLCETSLAGSDKKFN
DVTELSGINLMEEERELLSSLPKKDSRVFKSFRRVVHEEEGRTILQKVPLQRKLAEIMAK
SGIKHIKDDVERCLSLCVEERMRVLLSNIIRTSKQRTNPEKCRNRICITSDIRKQINEMN
QKEKDEQERKHGGEEKLKNDTAKEDKRSEQVKADKEQAEKRAKAANDAALASVGGDNVFS
KWKLMAEARQKPSSETRRNAKKLSGGQRLGKKNHGSPKVVRSISVKDVIAVVEKEPQMSR
STLLYRLYDRICSYVPTQDKTEKLLISKTSLSNIFVSSYSAVSDTITKS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggatccctcccttttgaagctcctcgaagaagatgacgaggatgaatctatgcactcg
aaggaagacgtcgacgccttccaggcctctctgattcgagaaatcgaaggaggaaatcat
tcttggagtcagcagtttgcagcatggaataatggtattactcaagatgctaataccaat
aagctccatatccttgagagcactcagatgaaagagcaacaacaacaatctgttttaggg
agtcaagaccgagaattaaagccagaagatgaatcacccgtacagcacaaccacaacctg
cctcagtaccatctacaaccaggtggactctctgagaatccttcccatgttccccaagca
agtgacttgcagtctaggaacaactctgttagtactgaaccagaaaacccccaacctctg
tatatgaaactgcaaagcataagtgttcaacgggctcatgggttggaacaacctgttggc
tctgtaaatcttggtccaacacaactacaagtcggtgaattgtttcgtctattgagaccc
caagttgacaaagatagagggacgcagctcaatacactgttttataaattcaagagtaac
gaagttacaaaggaaagtttcttacgacaagcaaggaatattttaggtgaacgaatgatc
ttatgggcagttaggaaactgcaacaacagcagggaaacaagggggtcaaagtacctgat
ggcccaaaccattgcagagagccctttacttctgctgaccaatccctgatacaatcttta
actgaaggcatcagtgctaaaaaatctgacacttgtggaagtcatgataaccaactacat
tcaacaagttcggacaccttaagcagttcagctagtgtgcacggattacacaattctgag
agaccagtttctgtgaatggtccagctatggttcatggtggccatatattccccaaccaa
aataactcatccttgcctctaaatccggctccttgccaaggatcagtcaccaaggaccag
acaatgagcaatgatcagacagtggcccacgtgaagcagaaattgactgatcaaagcttt
gatcaggtacggaagccttgtcctgtggtgcggcaagacgtgtctaatgttccaatggaa
cagaggaatggtaacccaaggaggtcagatgatgacttactgaagcaatcatctgaaatg
gttttatcagcacctaccacccatgcaaactttgcctctccttcagtgaaaacacagctg
gactctagcacaatggttaatttctctgccccagctgcgaccattctcccaggaactatt
gttagaacgacacaaggtcagaaaaaaactttggaggcacaaggttcttcgctaccacca
ttgagtaagaggcaaaaactatgtgaaacttctttagctggaagtgataaaaagttcaat
gatgttactgaactcagtggcatcaatcttatggaagaggaaagagaattattatcttct
ctacctaaaaaggacagtcgtgttttcaaatcatttcgaagagttgtgcatgaagaagaa
ggaagaacgattttgcagaaagttccactacagaggaagctggcagaaattatggcaaaa
agtggtataaagcatatcaaggatgatgttgagcggtgcttgtctctgtgtgtggaggaa
aggatgcgtgtattgttgtctaatataatccggacttcaaagcagcggactaatcccgag
aagtgtagaaatcggatttgtatcacatctgatatccggaaacaaatcaacgaaatgaat
cagaaggaaaaagatgaacaggaaaggaaacatggtggagaagaaaagcttaagaatgat
actgcaaaagaagataaacgttcagagcaagtgaaggcagataaggagcaagccgaaaag
agagctaaggctgcaaatgatgctgcccttgcatccgttggaggagataatgtgttttcg
aaatggaaacttatggcagaagcacgtcagaaaccttcttcagagacaagaagaaacgcc
aaaaaactttctggtggtcaaagattagggaagaagaaccatggttcaccaaaagtggtc
cgttcaatctctgtgaaggatgttattgctgttgtggaaaaagagcctcagatgtccaga
tcgacgctactgtatcgcttatacgataggatctgctcgtatgttccaacccaagataag
acagagaaattactaatatcaaagacaagtctttctaacatttttgtttcttcttattcc
gctgtaagtgataccattacaaaatcctaa
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