KEGG   Brassica oleracea (wild cabbage): 106302079
Entry
106302079         CDS       T04124                                 
Name
(RefSeq) probable pectate lyase 10
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00040  Pentose and glucuronate interconversions
boe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106302079
Enzymes [BR:boe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     106302079
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 106302079
NCBI-ProteinID: XP_013594048
UniProt: A0A0D3D4Z2
LinkDB
Position
C7:12571106..12575122
AA seq 439 aa
MAVSRSLLALSASLLVLAFFLCVNASTRAHETEELKSQSLTNSSTADKLSDGAWNEHAVE
NPEEVAALVDMTIRNSTERRKLGFFSCATGNPIDDCWRCDRNWHLRRKRLANCAIGFGRN
AVGGRDGRYYVVTDPSDNDAINPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFK
TIDGRGANVAIAGGACITIQYVTNIIIHGINIHDCRRTGNAMVRSSPSHYGWRTMADGDA
ISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYLTHHNEVMLMGHSDSYTRDKV
MQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRFLAPA
NPFAKEVTKRVGSWQGEWKQWNWRSQGDLMLNGAYFTRSGAATPASYARASSLGAKPSSV
VSMLTYSSGALKCRIGMRC
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggcggtctcgagaagtctcttagctctctcagcaagtttacttgttcttgcattcttt
ctctgtgtaaatgcatcgacaagagctcacgaaacagaggagcttaagtctcagagcctg
actaattcatcaacggctgataagttaagtgacggtgcatggaatgaacacgccgttgaa
aacccagaagaagtagctgcattggtcgatatgacgataaggaacagcacggagcggagg
aagctaggattcttctcatgcgccaccggaaacccaatcgacgattgctggcgatgtgat
cggaactggcacctccgtcgcaagcgtctcgccaactgcgccatcggtttcggccgcaac
gccgtcggaggacgcgacggtcgttactacgtcgtcacagatccatcggacaacgacgcg
attaacccgagaccgggaacgctccgtcacgccgtgatccaggaccgtccgttatggatc
gtattcaaacgcgacatggtgatcaccctgaaacaggagctgatcatgaacagcttcaag
accatcgacggaagaggcgcgaacgtcgcgatcgcgggaggcgcgtgtatcacgatccag
tatgtgacgaacatcatcatccatgggattaacatccatgattgtagacggacgggtaac
gctatggtgagaagctctccgtcgcattacgggtggaggacgatggcggacggtgacgcg
atttcgatattcgggtcgagtcatatttggattgatcataattctttgtctaattgtgct
gatgggttgattgatgcgattatgggatctacagccattaccatctccaataactatctc
actcatcacaacgaggttatgttgatgggacacagtgattcatacacaagagacaaggtg
atgcaagtgacaatagcatacaatcattttggagaggggcttatacagagaatgccaagg
tgtaggcacggttatttccatgttgtaaacaatgattacacacactgggtaatgtatgcg
attggtggaagtgctaacccaaccatcaacagccaaggcaatcggttccttgccccagca
aacccttttgccaaagaggtgacaaagagggtaggttcatggcaaggagaatggaagcaa
tggaactggagatcgcagggagacttaatgctcaatggtgcttacttcactagatctgga
gctgctactcctgcaagctatgccagagcctctagcttgggagctaaaccatcttccgtt
gtaagtatgcttacctacagttctggtgccctcaaatgcaggattggtatgcggtgttag

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