Brassica oleracea (wild cabbage): 106302342
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Entry
106302342 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 5 homolog A
KO
K18469
TBC1 domain family member 5
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106302342
Membrane trafficking [BR:
boe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
106302342
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
106302342
NCBI-ProteinID:
XP_013594325
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Position
C7:2133760..2145061
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AA seq
617 aa
AA seq
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MRARMDSQQDRLDSLEDLLDVMAMGNPTMQRALNERRAALGMPIRNPEDADPDHSQPSTA
TDYFDNIRVRSSFRQSQKHPVAFKSRSYSRRGYALLRRRLLMDPHILNDDRDLPTLFIDN
PLSKNPDSTWGQFFRNAELEKTLDQDLSRLYPEHWCYFQAPGCQGMVRRILLLWCLKHPE
YGYRQGMHELFAPLLYVLHVDIMRLSQVRXYEDYFTDRFDSLSFEEKDISYTFDFNKFVD
SMDDDEISKPPSSSTFTRRLMSNNELDHEVQSIVMLCDSYGAEGELGSVLSEXALMSGTN
GCVAMASFFGYSPAKGSHTRLPSVLEACTAFYRLLAVVDSSLHSHLVELGVETQYFGLRW
LRVLFGREFSLQGLLLVWDEIFLADNSTKTFTYDDEHNGNNMFKVFDSPRGALLSGMAVS
MILYLRSSLLSSENATCCLQRLLNFPEEIDLDKIIQKKCYWEEKWRLLRKAEEEERQRSP
FTQKKKRWLKVTKLIRAVTDLSRFRRRTVLEGISQKIISNEEATECPVTVSKEKSPTQET
EEGSMGFHTVDEESVTSGEESSSVYSDPTSLVRDSNYLENDSDSSTASNSSPGENHNSED
SLRAENSHVSLEPTSPE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcggatggatagccaacaggatcgtttagactctcttgaagatctgctggac
gtgatggcgatgggaaacccaactatgcagagagcattaaatgagaggcgagcagctctc
gggatgccaatacggaatcccgaagatgccgatccagaccattctcaaccgagcaccgcc
accgactacttcgataatatacgagtcagatcatcgtttcgccaatctcagaagcatccg
gtggcgtttaaatctcggagttattctcgccgaggatatgctcttctcagaagaagactt
ttaatggatccacatatactcaacgatgacagagatctccctactcttttcatcgataac
cccttgtccaaaaatccagatagcacatggggtcagttttttcgtaacgccgagctggaa
aaaacacttgaccaagacttatcaaggttatatccagaacactggtgttattttcaagcg
cctggatgccaaggcatggtaagacgcattctcttgttgtggtgccttaagcatcctgag
tatgggtatcggcaagggatgcacgagctctttgcaccactcctttatgtacttcatgtt
gatatcatgcgtctttctcaagtgcgannctatgaagattatttcaccgacaggtttgat
agtttatctttcgaagaaaaagacatcagttacacttttgatttcaataagttcgtggac
tctatggacgatgatgagattagtaagcctcccagttctagtacatttactaggcgactc
atgtccaacaatgagcttgatcatgaagtccagtccattgtgatgttgtgtgactcttac
ggagcagaaggtgaacttgggagtgtcttgtctgaanatgcactcatgagtgggaccaat
ggttgtgtcgccatggctagcttttttggttactctccagccaaaggatctcacacccgg
ttaccttcagttcttgaagcgtgtactgcattttatcgtctcttggctgttgttgactca
tctctgcacagccatctagttgaacttggtgttgaaactcaatactttggtcttcgttgg
ttgagagttttgtttggaagagagttttcgcttcagggtctcttgttagtgtgggatgag
atcttcttagctgataacagtacaaaaacgtttacatatgatgatgagcataacggaaac
aacatgtttaaggtctttgattctcctcgtggagccttactctcaggaatggctgtttca
atgatattgtacttaagatcttcattgctttcttctgagaatgcaacatgctgtctacag
agactattgaattttcctgaggagattgacctcgacaaaattatacagaagaagtgctat
tgggaggagaagtggaggctgttgcgaaaagccgaggaagaagaaaggcaaaggagtcct
tttacacagaagaaaaagaggtggttgaaggtgactaaacttatccgagcagtgactgat
ctatcacgttttaggagacgaactgttcttgaaggtatctctcagaagatcatttctaac
gaagaagctactgaatgtcctgtgactgtaagcaaggagaagagtcctactcaagaaact
gaggaaggcagtatgggttttcacactgtagatgaagagagtgtaacaagtggtgaggag
agttcatctgtctactcagacccaactagtcttgtcagagattcaaactaccttgaaaac
gattcagatagcagtactgcctcaaattcgtctcctggggaaaaccataatagcgaagat
tcactaagggcagagaactcacatgtctccttagaaccaaccagtcctgaatga
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