Brassica oleracea (wild cabbage): 106302413
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Entry
106302413 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 5-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106302413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
boe02000
]
106302413
04147 Exosome [BR:
boe04147
]
106302413
04090 CD molecules [BR:
boe04090
]
106302413
Enzymes [BR:
boe01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
106302413
Transporters [BR:
boe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
106302413
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106302413
CD molecules [BR:
boe04090
]
Proteins
106302413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_16
Zeta_toxin
AAA_21
AAA_15
AAA_30
AAA_25
AAA_24
nSTAND1
DUF815
Motif
Other DBs
NCBI-GeneID:
106302413
NCBI-ProteinID:
XP_013594382
LinkDB
All DBs
Position
C7:4537618..4543071
Genome browser
AA seq
1235 aa
AA seq
DB search
MKKGIIEEXAKTVPFYKLFSFSDSTDVLLMIVGSIGAIGNGLGFPLMTLLFGDLIDTVGR
NLFTNDIVELISKICLKFVYLGLGTFVAAFLQVSCWVITGERQAARIRSLYLKTILRQDI
VFFDVETNTGEVVGRMSGDTVLILDAMGEKVGKFIQLFVTFLGGYALAFVKGWLLTLVML
TSIPLLAMAGAATSLIFTKASSQQQAAYAKASTIAEQTCGSIRTVASFTGEKQATSSYKE
LINSAYKSSVKQGLSTGLGFGVMFLVFFCSYALAIWFGGEMILRKGYTGGAVINVMIIVV
ASSMSLGQAAPCLTSFAAGQAAAYKMFETIKRKPVIDSFDLNGKVLEDIQGEIELRDVCF
SYPARPREEVFGGFSLMIPSGKTTALVGESGSGKSTVISLIERFYDPNSGQVLIDGVDLK
EFQLKWIRGKIGLVGQEPVLFSSSIMENIGYGKEGARVQEIEAAAKLANAAKFIDKLPWG
LETMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMVN
RTTVIVAHRLSTVRNADMIAVLHRGKIVEEGSHLELLKDHEGAYSQLIRLQEINTESRRL
EISNGQQDGSIRNESSRGNSVSRMHNDDGSVSVLGLLAGQENTEKPKDMPQDVSITRIAA
LNKPEAPILILGTLVCALDGAIFPIFGLLFAKVIIAFFQPPHELRSDSRFWSIIFVLLGV
LSLVVYPIHMSLFAVAGGRLIRRIRSMCFEKVVHMEVGWFDEPENPSGPMGARLSADAAL
IRTLVGDSLALTVKNVASAVAGIIIAFVISWELAVIILVMIPLTGINNYVQVKFMKGFSA
DAKTKYEEASQIANDAVGSIRTVASFCAEEKVIEMYKKRCEDSIKSGTKQGVVAGLGFGL
SFFVLYSVYAACFYAGARLVKDGRTTYNGVFQVFLALTMTTIGISAASSFAPDSGKAKSA
AVSVFGIIDRKSKIDSRDESGMVLENVKGDIDFCHIEFAYQTRPDIQIFRDLCFSIRAGK
TVALVGESGSGKSTVISLLQRFYDPDSGHITLDGVELKKLQLKWLRKQMGLVGQEPVLFN
DTIRANIAYGKGGEEATEAEIVAASELCNAHKFISSIQQGYDTVVGERGIQLSGGQKQRV
AIARAIVKEPKILLLDEATSALDAESERVVQDALDQVMVNRTTIVVAHRLSTIKNADVIA
VVKNGVIAEKGTHETLMNIKGGVYASLVQLHMSAF
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggggataatcgaagaanaggcaaagacggtaccattctacaaactgttttct
ttctcagattctaccgatgtgttgttgatgatcgttggttcgatcggagctatcggaaac
ggtcttggttttccgttgatgacattattgtttggtgatcttattgatacggttggtcga
aacctattcacaaacgacattgttgagttaatctccaagatttgtttaaaatttgtctac
cttggacttgggacatttgtagcagcctttcttcaggtgtcttgctgggtgattacggga
gaaagacaagctgcaaggataaggagtttatatctgaagacaattctaagacaagacatt
gtattcttcgatgtcgaaacaaacacaggcgaagttgttggtcgtatgtcaggtgatact
gttcttatactagatgctatgggcgagaaggttgggaaatttatacagttgtttgtaaca
ttcttgggtggatatgcattagcgtttgtgaaaggatggttacttacacttgttatgtta
acctcaattcctcttctagctatggctggtgcagctacgtcgcttattttcactaaagct
tcttctcaacagcaagctgcttatgccaaagcatcaactattgctgaacaaacttgcggg
tctattcgaaccgttgcttcattcacgggagagaagcaggcgactagtagctacaaagag
ttgataaactcggcctataaatcgagtgtcaagcaaggtctctctacgggtttagggttt
ggagtaatgttcttggtgttcttttgtagctatgcgttggctatatggtttggtggagag
atgatactcagaaaagggtatacaggtggtgcagtgattaatgtaatgatcattgtggtc
gcgagttcgatgtctttagggcaagcagcgccatgtctaacctcatttgcagctggtcaa
gctgcagcttataaaatgtttgaaacaataaaaagaaagccagtgattgattcttttgat
ctaaacgggaaggttttagaagatatacaaggcgaaatagagctgagagatgtgtgtttt
agttaccctgcaaggcctagagaagaggtctttggaggattctctctgatgatcccaagt
ggcaaaactactgctttggtaggagaaagcggcagcgggaaatctactgtgatcagttta
atagaaaggttctatgatccgaattctggccaagtgcttattgatggtgttgacttgaag
gagtttcagctgaaatggattagaggaaagattggattggttggtcaagaaccggttctg
ttttcttcaagtataatggagaatattgggtacgggaaagagggagcaagagttcaagag
atagaagcagctgcaaagctagcaaacgcagctaagtttatcgataagttgccttggggt
ttggagacaatggtaggtgaacatggaactcagctctcaggaggacagaaacagaggatt
gcaatcgctagggccatacttaaagatccaaggattttgctgttagatgaagcgacaagt
gctcttgatgcagaatccgaacgagtggttcaagaagctttagatagggtgatggttaac
cggactactgtgattgtcgcacatcggttaagcacagtgagaaatgctgatatgattgct
gttcttcaccgtggaaagatagttgaagaaggttcacatttggagttactcaaggatcat
gaaggggcttattcacaacttatacggctacaagagataaacacagaatcaagacgatta
gagatttcaaatggacagcaagacggatctatcaggaatgaatcatcaagaggaaatagt
gtcagtaggatgcataatgatgatggatctgtttctgttcttggtttacttgcaggacaa
gaaaacactgaaaagcctaaagatatgccccaagatgtgtcgattacacgaattgctgct
cttaacaaaccggaggctcccattctcatacttggaaccttagtatgcgcacttgatggc
gctatattcccaatcttcggactcctctttgctaaagttatcatagctttcttccaacca
cctcatgagctgaggagcgattcgagattctggtcgataatatttgtgcttcttggtgta
ctctctttggtagtgtatccaatacatatgtctttgtttgctgtagctggggggagactg
attcgtaggataagatcaatgtgttttgagaaagttgttcacatggaggttgggtggttt
gatgagcccgagaacccgagtggtcccatgggagcaaggctctctgctgatgcagccttg
atcaggacacttgtgggcgactctttggctctaactgtcaagaacgttgcatccgcagtg
gcgggaataatcatagcttttgtgattagttgggagttagctgttattatcttagtaatg
attcctttaacaggaatcaataattacgttcaggttaagttcatgaaaggcttcagtgca
gacgcaaagacaaagtacgaggaggcgagtcaaatagcgaacgatgcggttgggagtata
agaacggttgcatctttctgtgcggaggagaaagtgatagagatgtataagaaacgatgt
gaagattcgatcaaatcgggaacgaagcaaggagtagtcgcaggattagggtttggtctc
tccttcttcgttctttactctgtctatgctgcttgtttctacgcaggtgctagattggtt
aaagacggaaggacaacctacaacggtgtttttcaggttttcttagcattgacgatgaca
acaattgggatttctgcggcgagttctttcgctcctgattcaggcaaagctaagagtgct
gctgtttcagttttcggaatcatcgataggaaatcaaagatagactcgagagatgaatca
gggatggtgttggagaatgtaaagggagatatcgatttttgtcacatagagtttgcttac
caaactagacctgatattcagatatttcgtgatctttgtttctccattcgtgccggaaag
actgttgctttggtcggagaaagtggatcaggcaaatctacggttatatctctgttacag
aggttttacgatccagattcgggtcatatcactttagacggagttgagctcaagaagctg
caactgaaatggctgagaaaacaaatggggcttgtagggcaagagcctgtactgttcaac
gacacaatacgagccaacattgcttatggaaagggaggagaagaagcaaccgaggctgag
atcgtagctgcttccgagctctgtaatgctcataaattcatctctagtatacaacagggt
tacgatacggtggtcggggagagagggatacagttatcaggaggacagaagcagcgcgtg
gcaattgcacgtgccatcgtgaaagagccgaagatcttgttactggacgaagcgacgagc
gcgttggacgcagaatcagagcgtgtggttcaggacgcacttgaccaggtgatggtgaac
cggaccaccatcgtggtggctcacaggctttcgacgatcaagaatgctgacgtcatcgcc
gtagtgaagaacggtgtgatcgcggagaaagggacgcacgagacgttgatgaatatcaaa
ggtggtgtttatgcttccctcgttcaacttcacatgagtgctttctaa
DBGET
integrated database retrieval system
