Brassica oleracea (wild cabbage): 106302670
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Entry
106302670 CDS
T04124
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106302670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106302670
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
106302670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
106302670
NCBI-ProteinID:
XP_013594586
LinkDB
All DBs
Position
C7
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AA seq
161 aa
AA seq
DB search
MGFGSVFSLVSDRLVLVELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGLKRKLASKL
SVNENVLVSGLEVGECIGMWLRPNFETLMYPFLPPNVKHPKECLKLFLGRLALHQQFFVP
KNFKLLAVPLSQIHENEKTYGQIISQIPKLLSKFSFNMMEI
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgggttttggtagcgtcttctcattggtcagcgacagattggtgttggttgaattgttc
aagcatcctcatgtattgcttcttcagtatagaaactccatcttcaagcttcctggtggt
cgtttgagacctggtgaatcagatattgaaggtctgaaacgcaaactcgcgtcaaagctt
tcggttaacgagaatgttcttgtttcgggtttggaggtaggagaatgcattgggatgtgg
ttgagaccaaactttgagacactgatgtatccattcttgcctcccaatgtgaaacaccca
aaggaatgcttaaagctttttcttgggagactagcgctacatcagcagtttttcgtgcct
aaaaacttcaaactcctcgctgttcccttgtcccaaatccatgagaatgaaaagacttat
gggcaaatcatatcgcagattcccaagcttctttcgaagttctccttcaacatgatggaa
atatga
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