Brassica oleracea (wild cabbage): 106303033
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Entry
106303033 CDS
T04124
Name
(RefSeq) nuclear poly(A) polymerase 1-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106303033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106303033
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
106303033
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
106303033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
106303033
NCBI-ProteinID:
XP_013594859
UniProt:
A0A0D3DA06
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All DBs
Position
C7:complement(29501932..29504212)
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AA seq
693 aa
AA seq
DB search
MNKIQSMASVQQNRQIRYGITEPISLGGPTELDVIKTKALENYLQDAGLYESNEEALRRE
EVLGRLDEIVKTWIKKISRDKGLSDETVEQANAKIFTFGSYRLKVHGPGADIDTLCVGPR
YATRGNGFFGELHRMLSELPEVTELHSVPDAYVPLMGFKLNGVSIDLLYAKLPLWIIPED
LDLSDDSILQNADEQTVRSLNGCRVTDKIFRLVPNIQSFRTTLRCIRFWAKKRGVYSNVS
GFLGGINWALLVARICQLYPNASPNMLVSRFFRVYTQWRWPNPILLCSIDEEGSSSLGLQ
VWDPRRNPKDLLHKMPIITPAYPCMNSSYNVSASTLRIMTGEFQRGKDICAAMEGNEADQ
WDTLFEPFGFFEAYKNYLQINISASNVEDLKKWRGWVESRFRQLTLVIERHTCDMLQCHP
HPHGFQDDSKPLQCSLFMGLQRKQGVTAVGGEPFDIRRTIEEFKQTVYGYTLWSPRMEIN
VSHVMRRSIPSFVFPGGVRPLRNSKGTWDSKRSSEQRVSSTGSSSSTITSCESKGGKKRK
LGDDETFTDQLRNSKRVAVSVHVENGEDGSPNSSVESICSAPMKELCTKVEYDPISKGVG
ESHPVEKIATPQASLSQESEEVEDNFGFRNQVVKQIPSKDAFSKGAVEVEELEDVPTQQS
VVTHKASVQLQKPIIKLNFTSLSTINAKNLRAY
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaatacaatcgatggctagtgtccagcaaaacagacaaattagatacggtatt
acagaacctatctctctaggaggaccaacggagcttgacgtaatcaagacaaaagcccta
gagaactacttgcaagacgctggattatacgaaagcaacgaggaagctcttagaagagag
gaggttcttgggagactagacgagatcgtaaaaacatggattaaaaaaataagccgtgac
aaagggttaagcgatgagacggttgaacaagcgaacgccaagatattcaccttcggttct
tatcggctaaaggtacatggacctggtgctgatatcgacactctatgcgttggtccaaga
tacgcaacaagagggaatggtttctttggagagctacacagaatgctttcggagttgcct
gaagtgacagagctccactctgtccctgatgcttatgttcccttgatgggtttcaaactt
aatggagtctctattgatctcctctacgcaaagcttcctctatggattatccctgaagac
ttggatctatcagatgattcaattctacagaatgctgatgagcaaactgttagaagcctc
aacggttgtagagttacagacaagatcttccgcttggttcctaacattcagagtttcagg
acgacgttaagatgcattaggttttgggccaagaagcgtggtgtgtactctaacgtctct
ggctttcttggtggtataaactgggcgttgcttgtagctagaatctgtcagctttatcct
aacgcatcaccaaacatgttggtgtctcggttctttagagtctacacgcaatggcgttgg
cccaatcccatccttctttgctctatcgatgaagaaggttcctcctccttaggtcttcaa
gtttgggatcctagaagaaaccctaaagacttgttgcacaagatgcctatcattactcct
gcttatccttgtatgaactctagttacaatgtctccgcgagtacactgaggattatgaca
ggagagtttcagagaggtaaagatatatgcgcggctatggaaggaaacgaagctgatcaa
tgggatacactttttgagccgtttgggttctttgaagcgtataagaactatcttcagatc
aacatctctgcttctaacgtggaggatctgaaaaagtggagaggatgggttgagtcacgt
ttcagacagctgacgttggtgattgagagacatacttgtgacatgcttcagtgccaccct
catccacatggtttccaagatgattcaaaaccgctacagtgttctttattcatgggtctg
caacgtaaacaaggagttacagcagtaggaggagaaccgtttgatatcagaagaactatt
gaggagtttaaacaaactgtttacggttacacgttgtggtctcctaggatggagattaat
gttagccatgtaatgcgaagaagcatacctagctttgtgtttcctggtggagttagacct
ttgcgtaactcgaaaggaacttgggacagcaaacgcagttcagagcagagagtttcttct
acagggagttcatcatctactattactagttgtgaaagtaaaggtgggaagaagagaaag
ttgggagatgatgagacattcaccgatcagttaaggaactcaaaacgtgttgcagtttca
gtgcatgtagagaacggcgaagatgggagtccaaattcatctgttgaatccatttgttca
gctcctatgaaagaactttgtactaaggttgaatatgatcccatcagtaagggtgtagga
gagagtcatccagtagagaagatagccactcctcaggcttctcttagtcaagaaagtgag
gaagttgaagacaactttggcttcagaaatcaagtggttaagcaaattccaagtaaagat
gcattctccaaaggagcagtggaagtggaagaactcgaagatgttccaacgcaacagtca
gtggtgacgcataaagcttcagtgcaactgcagaagccgataatcaagttgaatttcaca
tctctaagcacaatcaatgccaagaacctcagagcttattga
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