Brassica oleracea (wild cabbage): 106303304
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Entry
106303304 CDS
T04124
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Module
boe_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106303304
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
106303304
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
106303304
NCBI-ProteinID:
XP_013595067
UniProt:
A0A0D3DET3
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Position
C7:40909455..40911191
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AA seq
420 aa
AA seq
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MEFTIIHYLRVLFFFIASSSYSFVVPGDKSSVLTVDVRSFGARANDHRDNTKAFVAAWDK
ACTSSSSSVDLIIPRGEFHVGPLRFSGPCTNVTHLTVRVKGHLKASTDLSKYRSGGGWIE
FGWINGLTLTGGGTFDGQGALAWPFNNCTTDSHCKLLPTSLKFVGMNRTVVRRISSVNSK
FFHIALVQCRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDCVSIGQGNS
QITITSIKCGPGHGISVGSLGRYPNEKDVKGLVVRDCKMSGTTNGIRIKTWADSPGLSAA
TNMTFQNIIMSNVTNPIIIDQSYCPFSSCTSSVPSKVKLSEIYFKNIRGTSSSKVAVQLH
CSEGMPCKKVYLENVHLYLASSSGGSGKQQSSNGGSEAVSSSCRYVRANYIGTQSPPPCH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggagtttacaattattcattacctcagagttctcttcttcttcattgcatcatcttct
tacagttttgttgttcctggagacaaaagctctgtccttactgttgatgtccgtagcttt
ggtgctcgagctaatgaccacagagataacacgaaggcctttgtagcagcctgggacaag
gcgtgtacttcatcttcaagctctgtagatcttatcattccaagaggagagtttcatgtt
ggtccgctcagattctctggtccttgcactaacgtaacacatctcactgtccgagtaaag
ggtcatctcaaggcatcaactgatctgtcaaagtacagatcaggaggtggttggattgag
tttggatggatcaacggtttaactctcaccggaggtggaacatttgacggtcaaggcgcc
ttagcttggccgtttaataactgtactactgattctcactgcaaactcctcccaacaagc
ttgaagtttgtggggatgaacagaacagtagtaagaaggataagctcagtgaacagcaag
ttctttcacatagcattagtacaatgcagagacttcaaagggacaagactcaacattact
gctccttctgatagtccaaacactgatggaatccacatagaacgcagctcaaatgtctac
ttctcccgctctcatatcgcaacaggagatgattgtgtctctataggacaaggaaactct
cagatcacaatcacaagtatcaaatgtggacctggacatggtatcagcgttgggagttta
gggagatatccaaatgagaaagacgtgaagggactagtggtgagggattgcaagatgagt
ggtacgactaatgggataaggatcaaaacttgggctgattctcctggtctaagtgcagct
actaacatgacttttcagaacattattatgagcaatgtgactaatccaatcatcattgat
cagtcctattgtcctttctcttcttgcacttccagtgtaccatctaaggtgaagctgagt
gagatatacttcaagaacataagaggaacatcatcatcaaaggtagcggtgcagctgcat
tgtagcgaaggaatgccatgtaagaaagtgtatttagagaatgttcatctttatctagct
tcttccagtggaggaagtgggaaacaacagagcagcaacggaggaagtgaagctgtctct
tcttcttgtagatacgttagagctaattacattgggactcaaagcccacctccatgtcac
taa
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