Brassica oleracea (wild cabbage): 106303484
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Entry
106303484 CDS
T04124
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106303484
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106303484
Membrane trafficking [BR:
boe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106303484
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106303484
Exosomal proteins of bladder cancer cells
106303484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
TPR_COPA_B
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
NBCH_WD40
ENTH
Motif
Other DBs
NCBI-GeneID:
106303484
NCBI-ProteinID:
XP_013595194
LinkDB
All DBs
Position
C7:complement(47927733..47932064)
Genome browser
AA seq
975 aa
AA seq
DB search
MLTKFETKSNRVKGLTFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
NSQPLFVSGGDDYKIKVWNHKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLKKKTVSPADDLMR
FTQMNSDLFGGVDAIVKYVLEGHDRGVNAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGEL
QTPFVRYVVWSNDMDNVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTL
NHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYIFKLALLRK
RYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERVRFNLALESGNISVAVASAT
EINEKEQWYRLGVEALRQGNAGIVEFAYQQTKNFERLSFLYLITGKLDKLSKLMKIAEVK
NNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLTDTAERLATELGDNVPSLP
EGKTPSLLMPPSPVMCGGDWPLLRVMKGIFEGGLESAARGGAVDEDEEDAGGDWGEGLDM
VDVDGMENRDIEAILAEAEGAEEDNDEEGGWGELEGLDLPPELDTPKASANARSSVFVTP
TQGMPVSHIWSQKSSLAAEQAAAGSFDTAMRLLNRQLGIRNFAPLKSMFIDLFSGSHSYL
RAFSSSPVVPLAIERGWSESNSPNVRGPPALVYDFSQQEEKLKSGYKATTSGKDEKLTEA
LRLFLSILHTIPLVVVESRSEVDEVKELVSIAKEYVLGLKMELKRRQKKDDPVRQQELAA
YFTHCNLQLPHLRLALLNAMTVCYKAKNLATAYNFAKRLLETNPLESHARAARQIVQAAE
RNMTDTTELNYDFRNPFVICGSTYVPIYRGQKDVSCPYCTARFVPSQQGNICGVCDLAVI
GAAASGLICSPSQVR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaaatttgagacgaagagtaacagagttaagggcctcaccttccaccctaag
cgaccatggatcctcgccagtttgcacagtggtgtgatccagctctgggattatcgtatg
ggtactttgatcgatcggttcgacgagcacgaaggtcctgttcgtggtgttcactttcac
aattctcagcctctattcgtctccggaggtgatgattacaagattaaagtttggaaccac
aaaacgcacaggtgcctcttcacccttctcggccatctcgactatatccgcactgtccaa
tttcaccacgagaacccgtggattgtgagtgctagtgacgatcagactatccgcatatgg
aactggcagtcacggacttgtatctctgtgttgactggccacaatcattatgtcatgtgt
gcttctttccatcctaaagaagacctggtcgtgtcagcatctttggatcagactgtccgt
gtctgggatattggttctcttaagaagaagacagtatctcctgctgatgacctcatgcga
tttacgcagatgaactctgatctttttggtggtgttgacgctattgttaagtatgtcctc
gaaggtcatgatagaggagtaaatgctatcttttatgctgggactggaaatttgctttgt
agatcagaggataaagtggtaatatttgaccttcagcaaaggcttgttcttggtgaactt
cagacaccgtttgttaggtatgttgtttggtccaatgatatggataatgttgctttgctc
agcaaacacactatcattattgcgagcaaaaaacttgtcctgcagtgcacacttcatgag
acaatacgtgtgaagagtggagcttgggatgacaatggtgtcttcatctacacaactttg
aaccatatcaagtattgtcttcctaatggagatagcgggatcatccgaaccctggatgtg
cctatctatatcaccaaggtttctggaaacacaatcttttgcttggaccgggatgggaaa
aacagggcaatcaccatcaatgcaactgaatacattttcaagcttgcactgctgagaaag
agatatgatcatgtcatgagcatgataaagaactcccagctctgtggacaggctatgatt
gcttacctgcagcagaaaggattccctgaagttgccctccattttgttgaagacgagaga
gtccgattcaacctggctcttgaaagtggcaacatcagcgtcgctgtggcgtccgctaca
gagattaatgagaaagagcagtggtatagacttggagtggaggctcttcgccaaggtaat
gctggaattgttgaatttgcgtaccagcaaacgaagaactttgagaggttatcttttctt
tacctcattactggtaagttggacaagctttcaaagttgatgaagattgcagaagtgaag
aacaacgtgatgggtcagtttcacaatgctctctacctaggagatgttaaagagcgtgtc
aagatacttgagaatgctggtcatttacctctcgcttatatcactgcttcggttcatggt
ttaacggacactgctgagcgacttgcgactgagctaggagacaacgtgccctcgttacct
gaggggaaaactccgtcgcttttaatgccaccatctcccgtcatgtgtggtggtgattgg
cctcttctaagagtgatgaagggaatatttgaaggcggacttgagagtgcagccagagga
ggggctgttgatgaagatgaagaagatgctggtggtgattggggtgagggacttgacatg
gtcgatgttgatggaatggagaacagagacatcgaagccattttggcggaagctgaagga
gcggaagaagataatgatgaagaaggtggatggggtgaacttgagggcttggacctccca
ccagagcttgacactcctaaggcctctgctaacgcacgttcatccgtcttcgtgacacct
actcaaggtatgcccgtaagccatatttggagccagaaatcatcacttgctgctgagcaa
gctgcagctggaagcttcgacactgcaatgcgtctgctcaacagacagcttggcataagg
aactttgcccctttgaaatcgatgtttattgatttgttcagtggcagccatagctacctg
cgtgctttttcttcatctcctgtggttccacttgccattgaacgtggatggagcgagtca
aacagtcccaacgtccgtggcccaccagctcttgtttatgatttctctcagcaagaagag
aagctcaagtccggctacaaagccacaacaagtgggaaagatgagaaattgactgaggct
ctccggctcttcctctctatcctccacaccatccctctagtggtggtcgagtcaagaagt
gaagtagatgaggttaaggaactggtcagtatcgctaaagaatatgtcctcggtcttaaa
atggagctcaagagaagacagaagaaagatgatccagtgaggcagcaggagcttgctgct
tacttcactcactgcaacctccaactacctcacttacgactcgcgctgttaaatgcaatg
accgtctgctacaaggccaagaatctcgccactgcctataacttcgctaaaagattgctg
gaaaccaacccattggagagccatgccagagcggctagacaaatcgttcaagccgctgaa
cgcaatatgactgatacaaccgagctcaattacgacttcagaaacccgttcgtgatatgt
gggtcaacctatgttccaatctacagaggtcagaaagacgtgtcctgtccatactgcacc
gccaggtttgttccaagccagcaaggaaacatatgcggggtctgtgatcttgcagtcatt
ggcgcagccgcatctggtttgatatgctcgccgtctcaggtccggtga
DBGET
integrated database retrieval system