Brassica oleracea (wild cabbage): 106303905
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Entry
106303905 CDS
T04124
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106303905
09123 Folding, sorting and degradation
03018 RNA degradation
106303905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106303905
03041 Spliceosome [BR:
boe03041
]
106303905
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106303905
mRNA degradation factors
5'-3' decay
Lsm complex
106303905
Spliceosome [BR:
boe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106303905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
106303905
NCBI-ProteinID:
XP_013595712
LinkDB
All DBs
Position
C7:36212206..36213958
Genome browser
AA seq
129 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPPGVGRGRGRGVDDGGARGRGRGAPMAKMSG
NRGAGRGRG
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctttcgctgctcaagactgctcaagggcatcccatgcttgtggagctcaag
aatggagagacgtacaatgggcatttagtgaattgtgatacgtggatgaacattcatctg
cgtgaagtcatctgcacatcaaaggacggagacaggttttggaggatgccggagtgttat
atccgcggtaacactatcaagtaccttcgagttccagatgaggtgattgataaagtacag
gaggagaagacccgcacagatagaaaaccaccaggggttggacgtgggagaggacgtggt
gtggatgatggaggggccagaggccgtggtcgaggagctccaatggcgaagatgagtggc
aacagaggagcaggtcgtggccgtggttga
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