KEGG   Brassica oleracea (wild cabbage): 106304149
Entry
106304149         CDS       T04124                                 
Name
(RefSeq) probable pectate lyase 6
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00040  Pentose and glucuronate interconversions
boe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106304149
Enzymes [BR:boe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     106304149
SSDB
Motif
Pfam: Pec_lyase_N Pectate_lyase_4 Beta_helix SANT_DAMP1_like
Other DBs
NCBI-GeneID: 106304149
NCBI-ProteinID: XP_013596000
UniProt: A0A0D3DAE6
LinkDB
Position
C7:30832892..30834850
AA seq 459 aa
MASAHLNIGSYVFAFASLFVAIVAPSVQGHVAVYDEYWTQRQTDALRQTIKSYDPNPFNV
TDHFNYHAALAMETTGADNGTRRELRQVRRGRRTKRRGGRHHSLNAIDKCWRGDKNWHKN
RKKLADCVLGFGRRTTGGKKGQFYVVTDASDHDLVNPKPGTLRHAVTRDRPLWIIFGRSM
IIKLQQELIITHDKTIDGRGENVHIMGGAGLTLQFVKNVIIHNIHIKHIKCGAGGMIRDC
EHHVGQRSKSDGDGINIFGATNIWIDHVSMTHCSDGMIDAIMGSTAITISNSHLTDHNEV
LLFGGKDGDVIDKKMQITVAFNHFGKRLVQRMPRVRYGLVHVVNNDYTHWEMYAIGGNKN
PTIISQGNRFIAPHKETCKQVTKREYTPYTEWKSWNWQSERDYFLNGAYFVNSGRANAWS
PAPKNPIHRKFAIRPQSGTGVRRLTKDAGTLGCRPGKSC
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggcgtctgctcatttgaatattgggagctatgtcttcgcctttgcctcgttatttgta
gccatcgtggctccatcggttcaaggtcacgtcgcggtatacgatgaatactggacccag
cgccaaaccgacgcattgcgacaaactataaaatcttatgaccctaatccatttaacgtc
acggaccactttaactaccatgccgcattagcaatggagacgactggtgcagacaacgga
acaaggagagagcttcgacaagttagacgcggtcggagaacaaagagacgtggcggaagg
caccactcccttaacgctatcgataaatgctggcgaggagacaaaaactggcacaagaac
cggaaaaagctagcggactgcgtcctaggatttggtcggagaacaaccggaggcaaaaag
ggacagttctacgtagtcaccgacgcatccgaccacgatctcgtcaatcccaagccagga
actctacgacacgcagtgactcgcgacagaccgctatggatcatattcggtagatccatg
atcataaaactgcagcaagaactgatcataacacacgataaaactattgacggtcgagga
gagaatgtacatataatgggaggtgcaggtttaacgttacagttcgtgaagaatgtgatc
atacacaatattcatatcaaacacattaaatgtggggctggtgggatgatcagagactgt
gaacatcatgttgggcagcgttcaaagagtgatggtgatggtatcaatattttcggagcc
acgaatatttggatcgatcatgtctccatgactcattgttctgatgggatgatcgatgcc
attatgggatcgaccgccattactatctccaactcccatttaaccgaccataacgaggtg
ctgttgtttgggggtaaagacggggatgtgatcgacaagaaaatgcagataacggttgcg
tttaaccattttgggaagagattggtccaaagaatgccaagggtcagatacggtttggtc
catgtagtgaacaatgactacactcactgggaaatgtatgctattggtgggaacaagaac
cctaccattataagtcaaggcaaccgtttcatcgctcctcataaagaaacttgcaagcag
gttacaaagagagagtatacaccttatacagagtggaagtcatggaactggcaatcagag
agagattacttcttgaacggagcttactttgtaaattcaggaagggcaaacgcgtggagc
cctgccccgaaaaacccaatccacagaaagtttgcgatccggcctcaatcaggaacaggt
gtaagaagactcactaaggatgctggtacgcttggttgcagaccaggcaagtcctgctga

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