Brassica oleracea (wild cabbage): 106304306
Help
Entry
106304306 CDS
T04124
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00900
Terpenoid backbone biosynthesis
boe01100
Metabolic pathways
boe01110
Biosynthesis of secondary metabolites
Module
boe_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106304306
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
boe01006
]
106304306
Enzymes [BR:
boe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
106304306
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
106304306
2.5.1.29 geranylgeranyl diphosphate synthase
106304306
Prenyltransferases [BR:
boe01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
106304306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
106304306
NCBI-ProteinID:
XP_013596174
UniProt:
A0A0D3A1G2
LinkDB
All DBs
Position
C1:complement(1317396..1318821)
Genome browser
AA seq
369 aa
AA seq
DB search
MASSVTLGSCPWVLHHHPSTQSKTPRSRSPSLITLKPITLTPKRTVSSASHTISSSLVTK
EDNNLKSTTSSSFDFMSYILRKADSVNRALDSAVPLREPLKIHEAMRYSLLAGGKRVRPV
LCIAACELVGGEESLAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVA
VLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVADISSEGLELN
DVGLDHLEFIHLHKTAALLEASAVLGGIVGGGSDEEIERLRKFARCIGLLFQVVDDILDV
TKSSQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLAL
ANYIANRQN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcagtgactctaggttcgtgcccatgggttcttcaccatcatccttcaacc
caatccaaaacacccagatctagatctccttctctcatcacccttaaacccatcaccctc
accccaaaacgcaccgtttcgtctgcttcccacaccatctcctcttccctcgtcaccaaa
gaagacaacaacctcaaatccaccacctcctcctccttcgacttcatgtcgtacatcctc
cgcaaagccgactccgtcaacagagccctggactccgccgtccccctccgggagccgctc
aagatccacgaggcgatgcgctactccctcctcgccggcggcaaacgcgtcaggcccgtc
ctctgcatcgccgcctgcgagctcgtcggcggcgaagagtctttagccatgccggcggcc
tgcgccgtcgagatgatccacaccatgtcgctgatccacgacgacttgccgtgcatggac
aacgacgacctccgccgcgggaagccgacgaaccacaaggtttacggcgaggacgtggcg
gtcctggccggagacgcgcttctctccttcgccttcgagcatttggcgtcggcgacgagc
tccgaagtttctccggcgagagtggtccgagccgtcggagagttggcgaaagctatagga
accgaagggctggtggcgggacaggtggcggatataagcagcgaaggattagagttaaac
gacgtcggattggatcatttagagtttattcatttgcataaaacggcggcgttgcttgag
gcttcagccgttttgggcgggatcgtcggtggagggagcgacgaggagatcgagaggctg
aggaagttcgcgaggtgtatcggtctgttgtttcaggtggttgatgatatcctggacgtg
accaagtcgtctcaggagctggggaaaaccgccgggaaagatttgatcgctgataagctg
acgtatccgaagctcatggggttggagaaatcgagagagttcgctgagaagttgaataga
gaggcgcgtgatcagcttttggggtttgattccgacaaggttgctcctttgttggctttg
gctaattacattgccaatagacagaactga
DBGET
integrated database retrieval system
