KEGG   Brassica oleracea (wild cabbage): 106304858
Entry
106304858         CDS       T04124                                 
Name
(RefSeq) probable pectate lyase 6
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00040  Pentose and glucuronate interconversions
boe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106304858
Enzymes [BR:boe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     106304858
SSDB
Motif
Pfam: Pec_lyase_N Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 106304858
NCBI-ProteinID: XP_013596699
UniProt: A0A0D3D975
LinkDB
Position
C7:complement(27236123..27238344)
AA seq 457 aa
MAFAYLNLGSYVIVFVSLSIAIVAPSVQAHIAVFDDYWTQRQANALRQTMESYEPNPLNV
TNHFNYHAALAMETTGADNGPRRELGQVKAGQKTRGGRFRSLNAIDRCWRGDKNWAKNRK
KLTDCVLGFGLKTTGGKNGPIYVVTDASDDDLLSPKPGTLRHAVTRDRPLWIIFARTMVI
KLQQELMITNDKTIDGRGVSVYITGGAGFTLQFVKNVIIHNIHMKFIKRGFGGLIRDSEE
HFGLRTISDGDGINIFGATNIWIDHVSMRNCSDGMIDAIMGSTAITISNSHLTDHNEVLL
FGGKDGDVIDKKMQITVAFNHFGKRLNQRMPRVRYGMVHVVNNDYTHWEMYAIGGNKNPT
IISQGNRFIAPHKETCKQVTKREYTPYTEWKSWNWQSERDYFLNGAYFVQSGKSNAWSAA
PKNPIPKEFTIRPQPGTKVRSLTKDAGTLDCRPGKSC
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggcgtttgcttatttgaaccttgggagctacgttatcgtcttcgtctcattgtctata
gccatcgtagctccatcggttcaagctcacatcgccgtcttcgatgattattggacccag
cgtcaagccaacgcgttgagacaaacaatggaatcttatgaacccaacccgttgaacgtc
acgaaccactttaactaccatgcagcattagcaatggagacgactggtgctgacaacgga
ccaaggagagagctcggacaagttaaagccggtcagaaaacacgtggcggaaggttcaga
tcccttaacgcgattgacagatgctggagaggagacaaaaactgggcgaagaacaggaag
aagctaacggactgcgtcctagggtttggtctgaaaacaaccggaggcaaaaacggaccc
atctacgttgtcacagacgcatcggacgacgatctgttaagccccaaaccaggaactcta
agacacgccgtgactcgcgacagaccactttggatcatatttgctagaaccatggtcata
aaactacaacaagagttgatgataacaaacgataaaaccatcgacggtcgaggagtgagt
gtttacataaccggaggtgcaggattcacgttacagttcgtgaagaatgtgatcatacac
aatattcatatgaagtttattaaaagaggattcggtgggttgattagagactccgaagaa
cattttgggcttagaacaattagtgatggtgatgggatcaatatctttggagctacaaac
atatggatcgatcatgtctccatgagaaactgttctgatggtatgatcgatgccatcatg
ggatcgaccgccattactatctccaactcccatttaaccgaccataacgaggtgctgttg
tttgggggtaaagacggggatgtgatcgacaagaaaatgcagataacggttgcgtttaac
cattttggtaagagattgaatcaaagaatgccaagggtgagatacggtatggtccatgta
gtgaacaatgactacactcactgggaaatgtatgctattggtgggaacaagaaccctacc
attataagtcaaggcaaccgtttcatcgctcctcataaagaaacttgcaagcaggttaca
aagagagagtatacaccttatacagagtggaagtcatggaactggcaatcagagagagat
tactttttgaatggagcttactttgtgcaatcaggaaagtcaaatgcatggagcgctgca
ccgaaaaatccaatccctaaagagtttacaatccgtcctcagccaggaacaaaggtaaga
agtctcaccaaagatgctggtacgcttgattgcagaccaggaaagtcctgctga

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