Brassica oleracea (wild cabbage): 106304858
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Entry
106304858 CDS
T04124
Name
(RefSeq) probable pectate lyase 6
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106304858
Enzymes [BR:
boe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
106304858
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
106304858
NCBI-ProteinID:
XP_013596699
UniProt:
A0A0D3D975
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Position
C7:complement(27236123..27238344)
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AA seq
457 aa
AA seq
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MAFAYLNLGSYVIVFVSLSIAIVAPSVQAHIAVFDDYWTQRQANALRQTMESYEPNPLNV
TNHFNYHAALAMETTGADNGPRRELGQVKAGQKTRGGRFRSLNAIDRCWRGDKNWAKNRK
KLTDCVLGFGLKTTGGKNGPIYVVTDASDDDLLSPKPGTLRHAVTRDRPLWIIFARTMVI
KLQQELMITNDKTIDGRGVSVYITGGAGFTLQFVKNVIIHNIHMKFIKRGFGGLIRDSEE
HFGLRTISDGDGINIFGATNIWIDHVSMRNCSDGMIDAIMGSTAITISNSHLTDHNEVLL
FGGKDGDVIDKKMQITVAFNHFGKRLNQRMPRVRYGMVHVVNNDYTHWEMYAIGGNKNPT
IISQGNRFIAPHKETCKQVTKREYTPYTEWKSWNWQSERDYFLNGAYFVQSGKSNAWSAA
PKNPIPKEFTIRPQPGTKVRSLTKDAGTLDCRPGKSC
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgcttatttgaaccttgggagctacgttatcgtcttcgtctcattgtctata
gccatcgtagctccatcggttcaagctcacatcgccgtcttcgatgattattggacccag
cgtcaagccaacgcgttgagacaaacaatggaatcttatgaacccaacccgttgaacgtc
acgaaccactttaactaccatgcagcattagcaatggagacgactggtgctgacaacgga
ccaaggagagagctcggacaagttaaagccggtcagaaaacacgtggcggaaggttcaga
tcccttaacgcgattgacagatgctggagaggagacaaaaactgggcgaagaacaggaag
aagctaacggactgcgtcctagggtttggtctgaaaacaaccggaggcaaaaacggaccc
atctacgttgtcacagacgcatcggacgacgatctgttaagccccaaaccaggaactcta
agacacgccgtgactcgcgacagaccactttggatcatatttgctagaaccatggtcata
aaactacaacaagagttgatgataacaaacgataaaaccatcgacggtcgaggagtgagt
gtttacataaccggaggtgcaggattcacgttacagttcgtgaagaatgtgatcatacac
aatattcatatgaagtttattaaaagaggattcggtgggttgattagagactccgaagaa
cattttgggcttagaacaattagtgatggtgatgggatcaatatctttggagctacaaac
atatggatcgatcatgtctccatgagaaactgttctgatggtatgatcgatgccatcatg
ggatcgaccgccattactatctccaactcccatttaaccgaccataacgaggtgctgttg
tttgggggtaaagacggggatgtgatcgacaagaaaatgcagataacggttgcgtttaac
cattttggtaagagattgaatcaaagaatgccaagggtgagatacggtatggtccatgta
gtgaacaatgactacactcactgggaaatgtatgctattggtgggaacaagaaccctacc
attataagtcaaggcaaccgtttcatcgctcctcataaagaaacttgcaagcaggttaca
aagagagagtatacaccttatacagagtggaagtcatggaactggcaatcagagagagat
tactttttgaatggagcttactttgtgcaatcaggaaagtcaaatgcatggagcgctgca
ccgaaaaatccaatccctaaagagtttacaatccgtcctcagccaggaacaaaggtaaga
agtctcaccaaagatgctggtacgcttgattgcagaccaggaaagtcctgctga
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