Brassica oleracea (wild cabbage): 106305142
Help
Entry
106305142 CDS
T04124
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106305142
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106305142
Spliceosome [BR:
boe03041
]
Complex C
Other components
Complex C specific factors
106305142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
AAA_22
DEAD
HA2_N
AAA_19
AAA_30
ResIII
AAA_7
AAA_23
nSTAND3
T2SSE
AAA_29
Motif
Other DBs
NCBI-GeneID:
106305142
NCBI-ProteinID:
XP_013596967
LinkDB
All DBs
Position
C1:6953461..6958172
Genome browser
AA seq
695 aa
AA seq
DB search
MAFWKPGTEKPSFVEDEEGGIVLMSNNLSSSSSSSFGYANIEKQRQRLPVYKYRTEILYL
VENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQSVSKRVADEMGV
NLGDEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIMVDEAHERSISTD
ILLGLLKKIQRRRPELRLIISSATIEAKAMFNFFNTSKKRQAPEGSTQGPKLEPAILSVE
GRGFSVKIHYVEEPVSDYIRSVVSTILLINEREPPGDVLVFLTGQDDIETAIKLLAEEAH
SHQKNSSGLLPLPLYSGLSRAEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSG
FSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYRLYTEDYFLKQMPGEGIP
EMQRSNLVSTVIQLKALGIDNILGFDWPSPPSPQAMIRALEVLYSLQILDDDAKLTSPTG
FQVAELPLDPMISKMILASSELGCSDEIITIAAVLSIQSVWVIARGVQKEQDEAKLRFAA
AEGDHITFLNVYKGFLESKKSSQWCYKNFLNYQSMKKVVEIRDQLKRIARRLGITLKSCE
GDIDAVRKAVTAGFFANACRLEPHSNGVFKTVRGSEEVYIHPSSVLFRVNPKWVVYQSIV
STERQYMRNVVTINPSWLTEAAPHFYQNRQNNMSL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttggaagccaggaacggagaagccaagcttcgtcgaggatgaagaaggaggc
atagtgctcatgtccaacaatctctcatcctcttcttcttctagttttgggtatgcgaat
atagagaagcagaggcagagattgccagtgtacaagtacaggactgagattctgtatctg
gtggagaatcacgccactaccatcatcgttggcgagacgggcagtggcaaaactactcag
attcctcagtatcttaaagaagctggatgggctgaaggaggccgagttattgcttgcaca
cagccaaggcgtttagctgtccagtcggtttctaagagggtggcagatgagatgggggtg
aatcttggggatgaagttggctacacaattcgatttgaagatcatacaacttcaggtgtg
actagtgtgaaatttctcactgatggagtacttatccgagagatgatggaggatcctctc
ttgacaaagtatagtgttattatggtagatgaagctcatgagagatctatttctaccgac
attttacttggtctcttaaaaaagatacaacgtcgtcgtcctgagctgcgccttatcatc
tcgtcagccacaatcgaagcaaaagcaatgttcaatttcttcaataccagcaagaaacgc
caggcgccagaaggtagtacccaaggaccaaagttggaacctgcaatcttatctgtcgag
ggcagaggcttcagtgtgaaaattcactatgttgaggagcctgtttcagattatattaga
tcggttgtttcaacgattttgttgattaatgagcgggagccacctggggatgttcttgta
tttctaacaggtcaagatgatattgaaactgctattaaacttcttgcagaagaagctcat
agccatcaaaagaactcttcaggactgctccctctgccactatattcaggactttcacga
gcagaacaggaattgatctttactccaactcctagaggaaagagaaaagttatactctca
acaaacattgcagaaacatcattgactctggagggagttgtctatgtgattgatagtggt
ttctcaaagcagaaattctataacccaatttccgatatcgaaagtcttgtggtggcacca
atatccaaagcatctgctagacaaaggtctggtagggctggccgagttcggcctggaaag
tgttacaggctttacaccgaagattattttctcaaacaaatgcctggagaaggcataccg
gagatgcagaggtcgaatcttgtttcaactgtgatacagttaaaagctttgggcatagat
aatatattgggtttcgattggccttcacctccatccccacaagcaatgatccgggcactt
gaagtgctttattcacttcaaatccttgatgatgatgcaaaactcacttctccaacaggg
ttccaagtagcagaacttccactggacccaatgatatcgaaaatgatcctagcttcaagt
gagcttggttgttcagatgagatcattaccatcgctgcagttctctctatccaatccgtt
tgggtcattgccaggggagtacaaaaagaacaagatgaagcaaaactgagatttgcagct
gcggagggtgaccatatcacattcctcaatgtatacaaagggttccttgagtcgaaaaag
tcttcacagtggtgctacaagaattttctcaactaccagtccatgaaaaaagtggttgaa
atcagggatcaactcaaacggattgctcggagattaggcatcaccctgaaatcatgtgaa
ggagacatagatgctgtgagaaaagcagtgactgcaggttttttcgccaatgcatgccgc
ttagaaccacacagcaatggggtattcaagaccgttagaggctctgaagaagtttatatt
cacccatcgtccgtattgttcagggtgaatccgaaatgggtggtttaccaatccattgtc
tcgacagagcgtcaatacatgagaaatgtcgttaccatcaatccttcttggctgacagaa
gctgctccacacttttaccagaaccgccaaaacaatatgtccttgtaa
DBGET
integrated database retrieval system
