Brassica oleracea (wild cabbage): 106305729
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Entry
106305729 CDS
T04124
Name
(RefSeq) small RNA degrading nuclease 3 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106305729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106305729
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
RNases
106305729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
106305729
NCBI-ProteinID:
XP_013597541
LinkDB
All DBs
Position
C7:23821841..23827366
Genome browser
AA seq
533 aa
AA seq
DB search
MEHKLATAEKKVLVELVKLVQKKGLEGEKGGWKEFLNSYDKRFGASLSDPSRRSNDVLVA
FLLSFDKEEDRQLLARVLQCDANRNLIEKFKQESPDKETPEQRLVRMTITHPRYPIYYAF
PSHAEDWFVTKSGKKQSKVIKSTRMLAIDCEMVTCEDGSEAVVRVAAVDRDLKVVLDKFV
KPSLPVIDYKTEITGVTAEDLEKATLSVADIQKKLRRFLSKGTILVGHGLHNDLQVLKVD
HARVIDTSLVFKYSGANNSRTPSLLNLCKSVLDEELRMEGAAHNCVHDAAAAMKLVLAVV
EKGVETSIPQTEKMLEVEKTIQEAKKASLYLHKIPRNVPSQELKGVITGDFKVEVKPPKK
LGGYYSAEVVFSSQDEANQAFDNVDGDIVKDKMGLSQKMVEFQPSSGSVSRLYVRKNVQD
AEVSAKKRSNTEEIKVSSKRRKRENDAKETREENVNHCSSRESKCENHIKEIEELKENHI
KETEELKENHIKETEELKEKLKANELKLKAKELKLKAKEREVEAMVAEYEANH
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggaacataaactagccactgctgagaagaaggtgctggtagagctggtgaagctagtg
cagaagaaaggtttagaaggagagaagggaggatggaaggagtttctaaactcttacgac
aagagattcggagcgagtctcagcgatccttcgcgacgctccaatgatgtattggtcgct
tttcttttgagttttgacaaggaggaagataggcagctattggctagggttcttcagtgt
gatgctaatcgtaatctgattgagaaattcaagcaggaatcccctgataaagagactcct
gagcagaggctagttcgaatgactattacgcatcctaggtaccctatctactatgctttc
ccttcccacgccgaggattggtttgtaactaagtctggcaagaagcagtcaaaagtgatc
aagtcaaccagaatgcttgctattgattgtgagatggttacctgtgaagatggcagtgag
gctgttgttagggttgctgctgtggaccgtgatttaaaggtggttcttgacaaatttgtg
aaaccgagcctacccgttattgactataagacggaaatcactggagttactgctgaggat
cttgagaaagccactctgtctgttgctgatattcagaaaaaactgcggaggtttctttct
aagggaactattttagttggtcacggtttgcacaatgatcttcaagtgttgaaggtagat
catgcgagagtaatcgatacctctcttgtcttcaagtattccggtgcaaacaattctcga
acaccttctttgttaaatctatgcaagtctgttttggatgaggaactgcgaatggagggt
gctgctcacaattgcgttcacgacgctgccgctgctatgaagcttgtacttgctgttgtg
gagaaaggagtagagacctcgatcccacaaactgaaaaaatgttggaggttgagaagaca
atacaggaggcgaagaaggcaagtctctatcttcataagatccctcgtaatgtcccttct
caagagttaaaaggagttattacgggagatttcaaagtcgaggttaagccaccaaagaag
ctaggaggttattatagcgcagaagttgtttttagtagtcaagacgaagcaaatcaagca
tttgataacgttgatggagatatagtcaaggataaaatgggtttgtcacaaaaaatggtt
gagtttcaaccgagttctggatcagtatccagactatacgttcgtaaaaatgttcaagac
gctgaagtctctgccaagaagagaagtaacacagaggagatcaaagtgagttctaagagg
cggaagagggagaatgatgctaaggagacaagagaagagaatgtaaaccattgcagcagc
cgagagagcaaatgtgaaaatcatataaaggaaattgaagaactgaaggagaatcatata
aaggaaaccgaagaactgaaggagaatcatataaaggaaactgaagaactgaaggagaag
ctcaaagctaatgaactgaagctcaaagctaaagaactgaagctcaaagctaaggaacgt
gaggttgaggctatggttgcagagtacgaagcgaatcactaa
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