Brassica oleracea (wild cabbage): 106305820
Help
Entry
106305820 CDS
T04124
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106305820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106305820
03110 Chaperones and folding catalysts [BR:
boe03110
]
106305820
03029 Mitochondrial biogenesis [BR:
boe03029
]
106305820
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106305820
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106305820
Messenger RNA biogenesis [BR:
boe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106305820
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP60 / Chaperonin
106305820
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106305820
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106305820
Exosomal proteins of other body fluids (saliva and urine)
106305820
Exosomal proteins of breast cancer cells
106305820
Exosomal proteins of colorectal cancer cells
106305820
Exosomal proteins of bladder cancer cells
106305820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Spike_torovirin
Motif
Other DBs
NCBI-GeneID:
106305820
NCBI-ProteinID:
XP_013597670
UniProt:
A0A0D3D6Q0
LinkDB
All DBs
Position
C7:19029170..19032577
Genome browser
AA seq
607 aa
AA seq
DB search
MASSLSALPLADRNFREKSSLLHSSSSRFVLRARAAAKEVHFNRDGSVTKKLKAGADMVA
KLLGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDL
AGDGSTTSIVLAHGLITEGTKVVSAGINPIQVARGIDKTAKALVLELKSMSREIEDHELA
DVAAVSAGNDYEVGNMIANAFQQVGRSGVVTIEKGKYLVNNLEVVEGMQFNRGYLSPYFV
TDRRKREVEFHDCKLLLVDKKITNPKDMFKILDSAVKEEFPVLIVAEEIEQDALAPVIRN
KLKGNLKAAAIKAPSFGERKSHCLDDLAILTGATVIRDEMGLSLEKAGKEVLGTAKRVLV
TKDSTLIVTNGDTQKAVEERVSQIKKLVQNTEENFQKKILNERIARLSGGIASIQVGAQT
QVELKDKQLKVEDALNATKSAIEEGIVVGGGCALLRLAAKVDSIKDTLDNTEQKIGAEIF
KKALSYPIRLIAKNAGTNGNIVIEKVLLNENMMYGYNAAKNQYEDLMLAGIIDPTKVVRC
CLEHAASVANTFLTSDAVVVEIKENKPRPMINPPLPTSPAASSMFPDRNLPRLPQIMPRT
RNHFPRK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcactctctgcattacctctcgctgatcgaaattttcgcgaaaagtcttct
cttttgcactcttcgtcttctcgtttcgttcttagagcaagagccgccgcaaaagaggtc
cacttcaaccgtgatggctctgtcaccaagaaactcaaggcaggtgcagatatggtagca
aagctattaggcgttacattgggtccaaagggacgaaacgtggtgttgcagaacaagtat
ggacctcccaagatcgtcaatgacggtgaaactgttctcaaagagattgaattagaggat
ccgttggagaatgttggagtgaaacttgtgaggcaagcaggtgctaagactaatgacctt
gctggtgatggttccactacatctatagtgcttgctcatggccttatcactgaaggtact
aaggtggtttctgctgggataaatccaatccaagttgctcgtggtattgataaaactgca
aaagctcttgttttagagctcaagtctatgtccagagagattgaggatcatgagcttgct
gatgttgcagcagttagcgcagggaacgactacgaagtagggaacatgattgcaaatgct
tttcagcaagtaggaaggagtggtgtagttacgatagagaaaggcaaatacctagtgaac
aatcttgaggttgtggaaggaatgcagtttaatcgtggttacttatctccttactttgtt
actgatcgaaggaagagagaagttgagttccatgattgcaagctgctcttggttgataag
aaaataacaaatccaaaagatatgttcaagatacttgactctgctgttaaagaggagttt
ccagttcttatagttgctgaggagatagagcaagacgctcttgctcctgttattaggaac
aaactaaaaggtaacctgaaggcggcagctattaaagctccttcgtttggagagcggaag
agccattgcttggatgatcttgctatcttaactggagctactgtgatcagagatgagatg
gggttgagcttagagaaggcaggaaaagaagttttaggaacagcaaaaagggttctcgta
actaaggactcaacactgattgttactaatggggacactcagaaagcagttgaggaaagg
gtttctcagattaaaaaacttgtccagaacactgaggaaaattttcagaagaagatcctc
aatgaaaggatagccagattatctggtggaattgcatcaatccaggtaggtgcacagacg
caagttgagttgaaggataaacagctaaaggttgaagatgccctgaatgcaactaagtca
gcaattgaagaagggattgtagttggtggtggctgtgctctcctgagactggctgctaaa
gtagacagcattaaagacaccctagacaacacagaacagaagattggagctgaaatattc
aagaaagcattgagctaccctataagacttatagccaaaaacgcaggcacaaatggcaat
attgtcatagaaaaggtattattgaacgaaaacatgatgtacggttacaacgctgcaaag
aatcaatacgaagatctgatgttggctggtatcatcgatccgaccaaggttgtgagatgt
tgcttggaacacgctgcatcagtggctaatacgtttctgacgtcagacgctgttgtggtt
gagattaaagaaaacaaaccgaggccaatgattaacccaccattgcctacttctccagct
gcatcctccatgttccctgacagaaacttgccaagattacctcaaattatgcccagaact
cgaaaccactttccaaggaagtag
DBGET
integrated database retrieval system
