Brassica oleracea (wild cabbage): 106305832
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Entry
106305832 CDS
T04124
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106305832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106305832
03029 Mitochondrial biogenesis [BR:
boe03029
]
106305832
Membrane trafficking [BR:
boe04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
106305832
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106305832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
BCAS3_WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_RSE1_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
106305832
NCBI-ProteinID:
XP_013597683
UniProt:
A0A0D3DH07
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All DBs
Position
C7:complement(45534884..45537283)
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AA seq
366 aa
AA seq
DB search
MANQSSPSSSIYCASFNQDNSGFAISSRDSFKIFDSTTGRLCYERAAGAFVIVEMLYSSD
LLALVGAGEQASLSPRRLCLFNTTKGAPLKELNFLTSILAVRMNKKRLVVVLVEKTFVYD
LNTLVMLDTIDTAPNPKGLCAFSPSLEGCFLAVPASTTKGAVLVYNVMDLQSHSEIDAHR
SPLAAIALSSNGMYIATASEQGTLIRVHLVSDSTKSYSFRRGTYPSTIYSLSFGPSTQLP
DILIATSSSGSVHAFSLMLAINQRSKRSTSFLGSVLPDSVSDALDPAHHHVLQNAVSSGI
RSYAVVRKVDKLEGTSSPSQFTSIRATVSVITYSGYFQEYTLSINNKNESLWTLEREFNL
YPVISS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcagtcgtctccatcttcttctatctactgtgcttctttcaatcaagataac
agtgggtttgcgataagttcgagagattccttcaagatattcgattccactacaggcaga
ctctgttatgaacgagctgctggagcttttgttattgttgagatgttgtatagctctgat
cttcttgcacttgttggagctggtgaacaggcttctctatctccacggcggctctgcttg
ttcaataccacaaagggtgctcctcttaaagaactcaactttttgacttctatactcgct
gtccgtatgaacaagaaacggcttgttgttgtgcttgtggagaagacattcgtgtacgac
ttgaatacgcttgttatgcttgatactattgacaccgcgccaaatccaaaaggtctctgt
gcgttctctccgagtcttgaaggctgctttttggctgttccggctagtacaacgaaagga
gctgttttggtttataacgtcatggatttgcagtctcacagtgagattgatgcacatcgt
tctccattggctgcgattgccctttcttcaaatggaatgtatattgctacagcatctgag
caaggaactttgatccgagtccatcttgtttctgattcaaccaagtcatatagtttcagg
agaggaacatacccatcaactatatactcactctctttcggaccatccacacagctacct
gatatattgattgcaacgagctcttcaggctctgttcatgccttctctttaatgttggcc
ataaaccaaagaagcaaaaggtctactagctttcttggatcagttcttcccgacagcgtg
agtgatgcactagacccagcgcatcatcacgtgcttcagaatgcagtttcttccggaatt
agaagttatgcagtggttaggaaggtagacaaacttgaaggaacatcatctccatctcag
tttacatctattagggcgacggtatcggtgattacatatagtgggtatttccaggagtat
acgctgagtatcaataacaagaatgaatcgttatggacactggaacgtgagttcaacctc
taccccgtaatcagcagttga
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integrated database retrieval system
