KEGG   Brassica oleracea (wild cabbage): 106305872
Entry
106305872         CDS       T04124                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    106305872
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boe03400]
    106305872
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     106305872
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 UBM
Other DBs
NCBI-GeneID: 106305872
NCBI-ProteinID: XP_013597732
UniProt: A0A0D3DC06
LinkDB
Position
C7:35003553..35010506
AA seq 1460 aa
MGVQGLWELLAPVGRRVSVETLAGKRLAIDASIWMVQFIKAMRDEKGDMVQNAHLIGFFR
RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQTKIRKTAEKLLLNRLKEMRVK
EQANDLKKQRLQQSKSAGDKKRVSSESVKVPLRDSADEDGARGSCFREEKIDEISSASMV
GENVTDDAMKVSSKYDPKGKGVLLDEDDLDNRMKCNPEQGSSAGTKDYQEKLDEMLAASL
AAEEDRNFTNKASSSAAEVPSEEEGSEEDEQILLPAMNGNVDPAVLASLPPSMQLDLLVQ
MREKLMSENRQKYQKVKKAPEKFSELQIEAYLKTVAFRREINEVQRSAGGRAVGGVQTSR
IASEANKEFIFSSSFSGDKEVLASAREGRNDGKQNNTPQQSLPVPVKNISSVNKSDATAK
LEKNEPANPDENIEVYIDERGRLRIRNRHMGIQMTRDIQRNLHLMKEKEKTAFGSTSNDD
DETSNAWENFPSEDQFLENLPVNKNDVMNLDNPNDESMLRNQSAIEISFEHDGGGKDLDD
EDDMFLQLAAGGPVTISSAENDPKEDSLSWASDSDWEEVPVGQSSVISKLEVNSSNQHVP
EDISSDEEAAREDSTCENASNSMENDTVTKFSKGYLEEEADLQEAIQKSLLDLHDKESED
VLEENQTVGVNLVDDKPTQDSLCSSETVGKAEAEGTLDGIPILKASGAINEQSNTSVMED
GHIDITKQIGTHPSSSSDNVRRAVGNEMPQVKSGISPEKSFTIASESSMVSTMAKHNNED
GSESFGGEFIKVSPMPIADEERISSHIEILYDTDSQQETREENKLDDRTFNIESSIDLEE
KTVPVELSEAILEEEMRVLDQEYVNLGDEQRKLERNAESVSSEMFAEIQELLQIFGLPYI
IAPMEAEAQCAFMEQSNLIDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEKEL
GLSRDKIIRMAMLLGSDYTEGISGIGIVNAIEVVTAFPEDDGLQKFREWVESPDPTILGK
TDVKAGSGVKKRGYGSADNESTSGVSADDTEEIKQIFMDKHRKVSKNWHIPATFPSEAVI
SAYLDPQVDRSTEIFSWGKPDLLVLRKLCWEKFGWNGKKTDDLLLPVLKEYEKRETQLRM
EAFYSFSERFAKIRSKRIKKAVKGIGGGLSSEVVDHTLQEGPGIGNKKRLSPDESEDKTS
EKDLSKTDEKATNKRKRSEKPSSSRGRGSAQKRGRGRGRGRKNLLPELSDGSSDGEGDDN
DNVVGLQAPNEAKPGNPQKVRRSTRSRNPVKYSEKEDDQLDESRGNGESLSENLDDDDDD
FLKNLGKLGNVSEERAQNEPTTMDASNNDCPSEDYIQMGGGGFCVDEAETGGDAHVEDKA
SDDYRVMGGGFCVDEDETGEEDDAMDEEVLETEDVNSQNKAKRQNEDASLEEYGGGIEIG
NSSAGGLSAMPFLKRKKRKN
NT seq 4383 nt   +upstreamnt  +downstreamnt
atgggagtgcaagggctttgggagctactcgctcccgttggtcgccgcgtatccgtcgaa
accctagccgggaaacgattggctatcgatgcgagtatatggatggttcagtttataaag
gcgatgcgtgacgagaagggcgatatggttcagaacgctcacttgatcgggtttttccgg
aggatttgcaaacttttgttcttaaggactaagccggttttcgtctttgacggtggtact
ccggcgttgaaacgccgcactgtcattgcgcgtcgtcgtcagcgtgagaacgctcagacg
aaaattcggaaaaccgctgagaagttgctgcttaatcgactcaaggagatgagggttaag
gaacaagccaatgatcttaagaagcagagactacagcagagtaagagtgctggagataag
aagcgtgtatcttccgaatctgtgaaagttcctttgcgagactctgcagatgaagatggt
gcgcggggcagttgttttcgggaggaaaagatagatgagatatcttcagcatctatggtc
ggagaaaatgttactgatgatgctatgaaagtgtcttcgaagtatgatcccaagggaaag
ggagttttgttggatgaggatgacctggataacagaatgaagtgtaaccctgaacagggt
tcctcagcagggacgaaagattatcaggaaaagttggatgagatgttggcggcatccctt
gcagccgaagaagacaggaattttactaataaagcctcgtcttcagctgccgaagtcccc
tccgaggaagagggtagcgaagaagatgagcaaattcttttgccagcaatgaatgggaat
gtcgacccagctgttttggcttctcttcctccatccatgcaacttgatctccttgttcag
atgagagaaaaattgatgtcagaaaaccggcaaaagtaccaaaaggtcaagaaggcccct
gaaaagttttctgaattgcaaatagaagcatatctcaaaactgtagccttccgtcgagaa
ataaatgaagttcagagaagtgctggtgggagggctgtcggtggagttcaaacttctagg
atagcttctgaagcgaacaaagagtttatcttctcatcttctttttctggcgataaagaa
gtacttgcgtctgccagagaaggaagaaatgatggaaaacagaacaatacgccacaacag
tctttgccggtccctgttaagaatatttcttcggtgaataaatcagatgctactgccaag
ttggagaaaaatgaacccgcgaatcctgatgaaaatattgaagtttatatagatgaaagg
gggcgtctaagaatcaggaacagacacatggggatccaaatgactcgtgatatccagaga
aacttacatttgatgaaagaaaaggagaaaacagcttttggttctacgtcgaacgatgat
gatgaaacgtccaacgcctgggagaattttccttctgaggaccagtttcttgaaaattta
cctgttaataaaaatgatgttatgaatctagataatccgaatgatgaatccatgctgcga
aatcagtctgcaatagagatatcatttgaacatgatggtggtgggaaagatctggatgat
gaagatgatatgtttcttcagttggcagcgggaggaccagtgactattagttctgcagaa
aatgatcccaaagaagactctttgtcgtgggcatctgacagtgattgggaagaagtgcct
gttggacagagtagtgttatctctaagcttgaagtgaattcaagcaatcagcatgttccc
gaggatattagttccgatgaagaggcagcaagggaggacagtacttgtgaaaatgccagt
aactccatggagaacgatacagtaacaaagttctcaaaaggttatttggaagaagaagct
gatttgcaagaggctatccagaaaagtcttcttgacttgcatgataaggaatccgaggat
gtccttgaagaaaatcaaacggtgggggtaaacctagttgatgacaagccaactcaggat
agtctgtgttctagtgaaaccgttggtaaagctgaggcagagggaactctggacgggata
ccaatcttgaaagctagtggtgctataaatgagcagtccaacacttcggtaatggaagat
ggtcacatagatataacaaaacaaattggtactcacccttcttccagttctgacaatgtc
agacgtgcagtgggaaacgaaatgccacaagtaaagtcaggtatctcacccgagaaatca
tttactattgctagtgagagcagcatggtgtccaccatggctaagcacaataatgaagat
ggttctgaaagttttggtggtgaatttatcaaagtgtctcctatgcccatagctgatgag
gagagaatcagttcgcacatagagatactctacgacacagattcacagcaagaaacaagg
gaggaaaataaattggacgaccggacttttaatattgagagttcgatagatttagaagag
aaaaccgtgcctgttgaactttcagaagcaattttggaggaggaaatgcgagttcttgat
caagaatatgtaaatttgggtgatgaacagaggaaacttgagaggaatgctgaatctgtt
agcagtgagatgtttgcggaaatccaggagctactccaaatatttggcttaccatacatc
atagctcccatggaagcagaggcacagtgtgcatttatggaacaatcaaaccttattgat
ggcattgtcactgacgattctgatgtattcttgttcggagcaaggagtgtgtacaaaaat
atatttgatgatcgcaaatatgtggagacatactttatgaaggacattgagaaggagctt
ggcttgagcagagataaaataattcgaatggcaatgctgttaggaagtgattacacagaa
ggaatcagtggaattggtattgtcaatgctattgaagttgtgactgcatttcccgaggat
gatgggcttcaaaaatttcgtgaatgggttgaatcacctgatccaaccattttaggaaag
actgatgtaaaagcaggttccggtgtaaagaagcgcggatatggctccgcagataatgaa
agtacctcaggtgtttcggctgatgacacagaagaaatcaagcaaatcttcatggataag
cataggaaggtaagcaagaactggcacattccagctactttccctagcgaagctgttatt
tctgcctatttagatccacaagtggaccggtcgactgagattttctcatggggcaagcct
gatctcttagttcttagaaagctatgctgggaaaagtttggttggaacggtaagaagaca
gatgatctgctacttcctgtcttgaaggagtacgaaaaacgcgagacgcaacttcgtatg
gaagctttttattccttcagtgaaagatttgcaaagattcgaagtaaaaggattaaaaag
gctgtcaaaggaattggcggaggtctatcgtcagaagttgttgatcatactctccaggaa
ggtccaggaattggaaacaagaaaagactctctcccgatgaatccgaagataaaacttca
gagaaagatttaagtaaaaccgatgagaaggcgacaaacaaaaggaaacgctctgaaaaa
ccatctagtagtagaggcagaggcagcgcccaaaaaagaggacgcggaagaggaagggga
cgaaaaaacctcctccctgagctatctgacggtagttctgatggtgagggtgatgacaat
gataatgttgttgggttgcaggcacctaatgaagcaaaacctggcaatcctcaaaaagtg
cgaaggtcaacacgatctcggaatcccgtgaagtacagtgagaaagaagatgatcagttg
gacgagtcaagaggcaatggagaatcccttagtgagaatttggacgatgatgatgatgat
ttcctcaaaaacttaggcaaattagggaatgtctctgaagagagagcacagaatgaacca
acaaccatggatgcatcgaataacgattgtccttctgaagactatattcaaatgggaggt
ggtgggttctgcgtagatgaagccgagactggaggagatgctcatgtggaggataaagct
agtgatgattacagagtgatgggtggtggattctgtgttgatgaagatgaaacaggtgag
gaagatgatgcgatggatgaagaggtgttagaaactgaggatgtaaacagccaaaataaa
gctaaacgtcaaaacgaggatgcatcattggaggagtatggtggtggcattgaaattggg
aattcttcagctggaggattaagtgctatgcctttcctgaagagaaagaagaggaagaac
tga

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