Brassica oleracea (wild cabbage): 106305878
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Entry
106305878 CDS
T04124
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106305878
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
boe04812
]
106305878
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
106305878
Cytoskeleton proteins [BR:
boe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
106305878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
PDS5
Cnd1
HEAT_Maestro
TTI1
Tti2
UTP20
Adaptin_N
INTS1_R4
MMS19_N
TPR_TTI1_C
Sec7-like_HDS
MMS19_C
HEAT_DAAF5
Dopey_N
API5
SEN1_N
TPR_TTI1_N
Motif
Other DBs
NCBI-GeneID:
106305878
NCBI-ProteinID:
XP_013597743
UniProt:
A0A0D3D2D1
LinkDB
All DBs
Position
C7:850813..858126
Genome browser
AA seq
1438 aa
AA seq
DB search
MEEALEMARAKDTKERMAAVERLHQLLEASRKSLSPSEVTSLVDSCLDLLKDSNFRVSQG
ALQALASAAVLAGEHLKLHLNALVPAVVERLGDSKQPVRDAARRLLTTLMEVSSPTIIVE
RAGSYGWLHKSWRVREEFARTVTSAIGLFASTELPLQRVILAPILQMLNDPNQAVREAAI
LCIEEMYMQGGNQFREELQRHHLPSYMVKDINSRLERIEPQQRSTDSRSSHHASVNEVKA
SSVNPKKSSPKAKTSTRENSLFGGDPDITEKPIEPINVYSEKELIREFEKIASTLVPEKD
WSMRISAMRRVEGLVAGGATDYSCFRGLLKQLIGPLSTQLSDRRSTIVKQACHLLCLLSK
ELLGDFESCAEIFIPVLFKLVVITVLVIAESADNCIKTMLRNCKAARVLPRIAEAAKHDR
NAVLRARCCEYALLTLEHWPDAPEIQRSVDLYEDLIRCCVADAMSEVRATARMCYRLFAK
TWPDRSRRLFSSFDPVIQRLINEEEGGSHRRHASPSVRERHSQPSFSQTSAPSNLPGYGT
SAIVAMDRSSNLSSGGSLSSGLLLSQSKDLNKGSERSLESVLQSSKQKVSAIESMLRGLH
VSDRQNPAALRSSSLDLGVDPPSSRDPPFRASVPASNTLTNKTTAESMPSINRVSNRSGG
LGLSDIITQIQASKDSGRQTHRSNMLSESHPSFSSLTAKRVSERNERSSFEDNNDARRFM
VGHLDRQQMDNAYRDSTFRDSNASHVPNFQRPLLRKNVGGRLSAGRTRSFDDSQLQVGDM
SNYVDGPASLNEALNDGLNSSSDWCARVAAFNFLQTLLQQGAKGAQEVIQNFEKVMKLFL
RHLDDPHHKVAQAALSTLADLIPSCRKPFESYMERVLPHVFSRLIDPKEVVRQPCSSTLD
IVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNRYAGNPEISGNSGILKLWLA
KLTPLTRDKNTKLKEASITCIISVYNHYDSAGLLNYILSLSVEEQNSLRRALKQYTPRIE
VDLLNYMQSKKEKLRVKSYDPSDAIGTSSEEGYPGASKKNIFLGRYSGGSVDSDSGRKWS
SSQEPTTVTGGGVGQSVYSGTQEKLYHNFRSGISSASDGLNQKDSDYTFTSAGQNLISRT
SPNESSDKVENFDSVSPPHLEKNGLNMTNADSLEERHENEASRELDLSQYMLSSIKVSPT
PESGPSIPQILHMINASDGSPSSSKISGLQQLIEASVANEESVWTKYFNQILTVVLEVVD
DEDLSVREVALSLISEMLKSQKDAMEDSVEIVIEKLLHVSKESIPKVSSEAEQCLTTVLS
QYDPFRCLSVIVPQLVTEDEKTLVACINCLTKLVGRLSHEELMDQLSSFLPAVFEAFGNQ
SADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQVRLVTIYANRISQARTGAPIDPDT
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagctctggaaatggcgcgagccaaggacaccaaggagcgcatggcggctgtg
gagcggctccaccagcttctcgaagcttctaggaagagcctgagtccgtcggaagtgacg
tcacttgttgattcctgtttggatctcctcaaggacagcaatttcagagtctctcaaggt
gcgcttcaggcgctcgcttccgccgccgtgctcgccggtgagcatctgaagcttcacttg
aacgcccttgtccctgccgtagtggagcggcttggagacagcaagcaaccggttagggat
gcggcgaggcgtttgttgacaactctcatggaggtttcatctccgacgattatagtggaa
agagctggttcgtatggttggctgcataagagttggagagttagggaagagtttgcgcga
actgtcacgtcggccattggtctctttgcatctactgagctccctcttcagcgtgttatt
cttgccccgatacttcagatgttaaatgatccgaatcaagcagtcagggaagctgcaatt
ctctgcattgaggagatgtacatgcagggtgggaatcaatttcgggaagagcttcagcgc
caccatcttccatcatatatggtgaaggatattaattctagactggaacgtattgagcca
cagcagcgttctacagatagccgtagtagccaccatgcttctgttaatgaagttaaggct
tcaagtgtcaatcccaagaagagcagtccaaaggcaaagacttccacaagagagaactcg
ttatttggaggagatcctgacatcactgaaaaacccatcgagccaatcaatgtgtactca
gagaaggagctgatacgagagtttgagaaaattgcttcaacacttgtcccagagaaagac
tggtcaatgcgtatttcagctatgcggagggttgaaggacttgttgcgggaggtgcgact
gattactcttgttttcgaggtctcctgaagcaacttattggtcccttaagtacacagtta
tctgaccgaaggtctaccattgttaagcaggcttgccatctcttgtgtctcttatcaaaa
gagctactgggcgattttgaatcatgcgctgagatttttattccagtgcttttcaagctg
gttgtgatcacggtgcttgttatcgccgaatctgcggataactgcataaaaacgatgctg
cgtaactgcaaagctgctcgtgtacttcctcgcatagctgaggcagcaaaacatgaccgt
aatgcagttttgcgagcaaggtgttgtgaatatgcactgttaacactcgaacattggcct
gatgctccagaaattcaacggtcagttgatttatacgaggatctgattagatgctgtgtt
gcagatgctatgagtgaggtacgggcaacggctagaatgtgctacagactttttgcaaaa
acttggccggatcgttctcgtcgtttattttcctcctttgaccctgtcattcaaaggcta
ataaatgaagaagaaggtggaagtcataggagacatgcctcaccttctgtccgtgagaga
cactcccagccttcattttctcagacgtctgctccatctaatttacctggctatgggaca
tcagccatagtcgctatggatagaagttcaaatttatcctcaggaggatctctttcttct
gggctactcttatcccagtcaaaggatctcaataaaggttctgaacgtagtctagaaagc
gtgttacaatcaagcaagcagaaggtcagtgcaattgaaagtatgctccgaggactgcat
gtatccgatagacagaatccagcagcccttcgttccagtagtttggatctaggagttgac
cctccatcgtctcgtgatcctccattccgtgcttccgttccagcatccaatactctcaca
aataaaacaactgctgaatcaatgcctagtattaacagagtcagtaatcgcagtggtggc
cttggtttgtcagatatcatcacccagatacaagcttcaaaggactcaggaagacaaaca
caccgtagcaatatgttgtccgagtctcatcctagcttttcatccttgacagctaaaagg
gtctcagagagaaacgagagaagttcttttgaggacaacaacgatgccaggcggtttatg
gtgggtcatttagacagacagcagatggataacgcttatagagattcaacattcagggat
tcaaacgctagtcatgttcccaatttccagaggccacttttgaggaaaaatgttggggga
agattgtcggcaggcaggactaggagttttgatgatagccaactgcaagttggtgacatg
tcaaattatgttgatggtccagcgtctctgaacgaggcccttaacgatggactgaattca
agttctgattggtgtgccagagttgcagcatttaattttctccaaactttactgcaacaa
ggcgcgaaaggtgctcaagaggtgatccagaattttgagaaagtaatgaaactatttctc
cggcatttggatgatcctcaccacaaggttgcacaagcagcactgtcgacactcgcggat
cttataccatcttgccgaaagccttttgagagctacatggaacgagtcttaccccatgtg
ttttcaaggctaatcgatcctaaagaggtagttagacaaccttgctcgtctaccctggat
attgtcagcaaaacctacagcgtagattcgcttttacctgcgttgcttcgttcactggat
gagcagagatcaccgaaggctaaattagccgtgatcgaatttgccatcaactccttcaac
aggtacgctggcaaccctgaaatttcgggtaatagtggcattctgaagctttggctggca
aagttgacaccattaacccgcgacaagaataccaagttaaaagaagcttccatcacttgt
atcatatctgtttacaatcactatgattctgctggacttctaaattacattcttagtttg
tcggttgaggagcaaaactccttgagaagagccctcaaacagtatactccccgcatcgag
gtggacctattaaattatatgcagagtaagaaggagaaactgagagtaaagtcttatgac
ccatctgatgccattggaacatcatctgaagaaggatatccaggtgcttccaagaagaac
atattccttggcaggtactctgggggttccgtcgacagtgatagtggtaggaagtggagt
tcttcccaggagccaacaacggtcactggcggtggtgttggtcaaagtgtttacagtgga
actcaggaaaagctgtatcacaacttcagaagtgggataagttctgctagtgatgggttg
aaccaaaaggattctgattacacgtttacttcagcgggtcagaatttgatatcaagaact
agccctaatgaaagctcagacaaggttgaaaactttgatagcgtatccccaccacattta
gagaaaaatggtctgaatatgacaaatgctgattccttggaagaaagacatgaaaatgag
gcttcccgcgaattagatttgagtcagtacatgctctcatctattaaggttagcccaaca
ccggaatctggacctagcattccccagattctacatatgatcaatgcgagtgatggaagc
ccttcttcgagcaagatatctggactccagcaactaattgaagcctctgtagctaacgag
gaatcagtttggaccaagtacttcaatcaaatattgacggtagttcttgaagtggtcgat
gacgaagatttgtcagtcagagaagttgctctttcgctgatatctgaaatgctaaagagc
cagaaagatgccatggaagattcggttgagatagtgattgagaagctgcttcatgtctcg
aaggagtctattccaaaagtttccagtgaagctgagcaatgtttgaccacagttttatcc
caatacgatcctttcagatgcttaagtgttattgtgccacaattggtaacagaagatgag
aaaactctcgtcgcttgcatcaattgcttaaccaagcttgtgggtaggctctcgcatgag
gaattaatggatcaattgtcttcttttttgcctgcggtttttgaagcatttgggaaccaa
agcgcagatgtccgaaagacagtggtgttctgtctagtagacatatatataatgcttggg
aaagcattcttgccgtatttggaaggtctaaacagcacacaggttcgcctagtgacgatc
tacgcaaacaggatctcacaggctagaaccggtgcccctatcgacccagacacctaa
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